Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00353 GTAGAATGACTACTGTTAGATATTTGGTGATTTTTCGTTGCAGTTTCAAAGTTGCAACTTTCCATTCAAATAAAAAAAGGACAAAATATAAAGCGTTTGAGTGAATGTCCGGATGCTGATTCATAGCATTAGTTCTGATTCATTTTGTTATTTTGTTTGTGCAGGAAGGAAAGCTTGTTTTTTTCTATCAACAAGAAAAATGTCAGGTGAAGAGGGTGTTGTTGCAACTGAGCCAGTTGCTTCCATTCCAGGTGAGCCAATGGATATCATGACTGCATTACAACTTGTGCTCAGAAAATCTCTGGCTTATGGTGGTCTTGCCCGTGGCCTCCATGAAGCCGCGAAAGTGATTGAGAAGCATGCTGCGCAGCTCTGTGTTCTAGCAGATGATTGTGACCAGCCTGACTATGTTAAACTTGTTAAGGCCCTGTGTGCGGAGCACAATGTCAGCCTGCTGACAGTTCCTAGTGCCAAGACCCTTGGTGAATGGGCTGGTTTGTGCAAGATTGATTCTGAAGGAAAGGCGAGAAAAGTTACTGGTTGCTCCTGTGTGGTTGTCAAGGATTTCGGGGAGGAACATGAAGCATACAATGTTGTTCTGCAGCATGTGAAATCTCAATGA 622 0.4293 MLIHSISSDSFCYFVCAGRKACFFLSTRKMSGEEGVVATEPVASIPGEPMDIMTALQLVLRKSLAYGGLARGLHEAAKVIEKHAAQLCVLADDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQHVKSQ 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00353 169 Gene3D - 37 169 IPR029064 -
Pste6g00353 169 PANTHER 40S RIBOSOMAL PROTEIN S12 46 168 - -
Pste6g00353 169 FunFam 40S ribosomal protein S12 36 169 - -
Pste6g00353 169 SUPERFAMILY L30e-like 49 167 IPR029064 -
Pste6g00353 169 PRINTS Ribosomal protein S12E family signature 59 72 IPR000530 GO:0003735|GO:0005840|GO:0006412
Pste6g00353 169 PRINTS Ribosomal protein S12E family signature 73 89 IPR000530 GO:0003735|GO:0005840|GO:0006412
Pste6g00353 169 PRINTS Ribosomal protein S12E family signature 114 135 IPR000530 GO:0003735|GO:0005840|GO:0006412
Pste6g00353 169 PRINTS Ribosomal protein S12E family signature 139 152 IPR000530 GO:0003735|GO:0005840|GO:0006412
Pste6g00353 169 ProSitePatterns Ribosomal protein S12e signature. 55 73 IPR000530 GO:0003735|GO:0005840|GO:0006412
Pste6g00353 169 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 55 148 IPR004038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00353 Pste-Chr6 1179600 1180789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00353 45 169 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 73.600 3.36e-65 194