Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00338 atgaaaccttgtttaaagggcaagaacaaggatcgccatatcaaggtgaatgggagagaatgtcgtgttcaattatctccaaaatgtgctgctcgtatctttcaactcactcgtgagttaggcaaaaagacagatggtgagactattgagtggctcttacaccaggctgagccagcaattattgctgctactagcactggtatttctccttccaactacacattagtaaccaatgccaactcatcaacaatgggtaccactgatgctggaatttcaccttccaacaacactttggtttctaattccaccttggtgccatcagacataggaacggctcaagatgacaacttgatcaccaatattgtgcattcaaggacagatataccaatttcaccttttgatttcaactatgattggatacaacactctgatctaggtttttattaa 447 0.0 MKPCLKGKNKDRHIKVNGRECRVQLSPKCAARIFQLTRELGKKTDGETIEWLLHQAEPAIIAATSTGISPSNYTLVTNANSSTMGTTDAGISPSNNTLVSNSTLVPSDIGTAQDDNLITNIVHSRTDIPISPFDFNYDWIQHSDLGFY 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00338 148 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 9 93 IPR005333 GO:0003700
Pste6g00338 148 ProSiteProfiles TCP domain profile. 9 63 IPR017887 -
Pste6g00338 148 Pfam TCP family transcription factor 9 87 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00338 Pste-Chr6 1134442 1135031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00338 1 87 TCP Transcription Factor Family AT1G72010 56.322 2.19e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pste6g00338 TCP 1.6e-23 No_clan