Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00333 ATGGATTGTTCATCATGGATTAACACTTCCTTGGATCTCAACATTAATCCACGCAGAGTTCACGAAGAACTTCCCAAGGAAGTAGAAAGCAAGCTTTTCTCGCTGGGATTGTCAAAGTTTAACGTGGAGGAAGAGTCAACTAGTGAGTTGGAGGAGGAACTGAAGCGGGTGACTGCAGAAAACAAGAAGTTGGCCGAAATGCTCTCAGTGGTGTGTGAGAACTACAACACATTGAGAAGCCATTTGATGGAATATATGAGGAAAAATGGAGAAAAGGAGGTGAGCCCAACGTCGAAGAAAAGGAAGTCTGAAAGCAGCAACAACAATAGTAATTTGATGGGAACTAACAATGGAAACTCCGAGAGCAGCTCTACTGATGAAGAATCTTTCAAGAAACCAAGGGAAGAAACTATCAAAGCAAAAATTTCAAGAGTTTATGTGAGGACCGAAGCATCTGATACTAGCCTTATTGTGAAAGATGGATACCAATGGAGGAAATATGGGCAAAAGGTGACCAGAGATAACCCTTGTCCTAGAGCATATTTCAAGTGCTCTTTTGCTCCAAGCTGCCCTGTCAAAAAGAAGGTGCAACGAAGTGTTGATGATCAATCTGTTCTTGTTGCTACTTATGAAGGGGAGCACAATCACCCTCAGGCTTCCCAAATGGAGGCAACGTCAGCTTCTCTCAACACTTTCGCTCCAACACTTGTTACCCTTGACTTGACAAAATCTAAGGATTCCAAGAACACAAAACCTAAAGTAGATTCACCTAAAGTACAGCAGGTTTTGGTGGAACAGATGGCTACTTCTCTCACCACGGATCCTAATTTCAGAGCAGCACTTGTTGCTGCCATCTCAGGAAGATTGTTGCACAATAATTAA 882 0.4252 MDCSSWINTSLDLNINPRRVHEELPKEVESKLFSLGLSKFNVEEESTSELEEELKRVTAENKKLAEMLSVVCENYNTLRSHLMEYMRKNGEKEVSPTSKKRKSESSNNNSNLMGTNNGNSESSSTDEESFKKPREETIKAKISRVYVRTEASDTSLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPQASQMEATSASLNTFAPTLVTLDLTKSKDSKNTKPKVDSPKVQQVLVEQMATSLTTDPNFRAALVAAISGRLLHNN 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00333 293 Coils Coil 40 67 - -
Pste6g00333 293 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 35 289 IPR044810 GO:0003700
Pste6g00333 293 Pfam WRKY DNA -binding domain 159 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste6g00333 293 ProSiteProfiles WRKY domain profile. 153 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste6g00333 293 MobiDBLite consensus disorder prediction 88 135 - -
Pste6g00333 293 FunFam WRKY transcription factor 40 143 220 - -
Pste6g00333 293 SMART WRKY_cls 158 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste6g00333 293 MobiDBLite consensus disorder prediction 101 124 - -
Pste6g00333 293 Gene3D WRKY domain 141 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste6g00333 293 SUPERFAMILY WRKY DNA-binding domain 154 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00333 Pste-Chr6 1102643 1104046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00333 4 293 WRKY Transcription Factor Family AT1G80840 52.050 5.40e-98 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste6g00333 WRKY 3.3e-23 CL0274