Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00320 atgatggctactcctcctcctcaaaacgacgccgcatcatcgtcgccgacgaagaaaccgcaaccgatcccgtggacgcaccaggaaacggtgcacctaatccgcgcgtaccaggagaagtggtacgcgctgaagcgcgggcccctccgccacaaccagtgggaagaggtggcggtggttgtggcggcgcgttgcggctacgacctcgaccaccccgccaagtccgccctccagtgccgccacaaaatggagaagctccgccagcgctaccgagccgagaagaggcactccgccgccccccgcccccccgccggcgcgtggcagtacgcctccctcatggacgacctcgaacgcggccccctcccaatctccgccctcgcccctctccaaaacgacgacaccaccgatttccgaaacgacaacaccgatttccaaaacgacaacgatgattaccgaaacgacgacaacgacggcgacgattttttcagcaagtcgaagagtataaataacattctcagcgagagggcagtgagagtgagaactagattttgtggtgagaggtttgttgaagaagatgagaacgacgaagacgacgacgttttggggttgagcgcggaaatgagggcttttgcggagaggtttgttggaatggagagtttgaagatggagatggtgaaggaaacggagaggtgtaggttggagatggagaagaagcggattcagatgatcgttgactctcagcgcaggatcgttgactcaattggaagagcttttgggtctaacaagaggatcaagattactcaacaaatttga 813 0.0 MMATPPPQNDAASSSPTKKPQPIPWTHQETVHLIRAYQEKWYALKRGPLRHNQWEEVAVVVAARCGYDLDHPAKSALQCRHKMEKLRQRYRAEKRHSAAPRPPAGAWQYASLMDDLERGPLPISALAPLQNDDTTDFRNDNTDFQNDNDDYRNDDNDGDDFFSKSKSINNILSERAVRVRTRFCGERFVEEDENDEDDDVLGLSAEMRAFAERFVGMESLKMEMVKETERCRLEMEKKRIQMIVDSQRRIVDSIGRAFGSNKRIKITQQI 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00320 270 MobiDBLite consensus disorder prediction 136 155 - -
Pste6g00320 270 Gene3D - 25 92 - -
Pste6g00320 270 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 11 254 IPR044823 -
Pste6g00320 270 ProSiteProfiles Myb-like domain profile. 24 87 IPR001005 -
Pste6g00320 270 MobiDBLite consensus disorder prediction 128 155 - -
Pste6g00320 270 MobiDBLite consensus disorder prediction 7 24 - -
Pste6g00320 270 FunFam Trihelix transcription factor ASIL2 25 92 - -
Pste6g00320 270 MobiDBLite consensus disorder prediction 1 25 - -
Pste6g00320 270 Pfam Myb/SANT-like DNA-binding domain 24 116 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00320 Pste-Chr6 1069552 1071524 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00320 25 94 Trihelix Transcription Factor Family AT3G14180 32.857 2.71e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste6g00320 Myb_DNA-bind_4 4.1e-17 CL0123