Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00309 ATGGGTAATCACAAGTTTAGGTTATCAGATATGATTCCAAATGCCTGGTTTTACAAGCTGAGAGACATGGGGAGAAGAAGAAAGCAAAACACCACACCCTCTGGGAAAAAGAAGCAAACTTCATCCCCTTCAACCACACCTTCATCAAAACCAAACCAACCCCACCATCAATACAACAACTCCAGAAAATCCTATTACATCACAAGAGACCTTACTCCAACCATCAACAACAAACTCCACGCCTCACCCTCAAATACTCCAAAAATTCCCCCTCCAAGAAAATCATACAAACAAAGAACCAAAAGAAGAACCCCAAAAGTTGTCTCCTCAGGTTGTAGCTGCCGCACCACTCTTGACACCGTGTGGACCAAATCAGATTCACCACAAGAACACTCTTCCTCTTCCCCATTTGACACCTCTCCAGAGTCACAATCACCAGAATTCAGCAGAACAGACTGTGTTCTACCATGTTCATCATTCGATGAAATGGTTTCCTTGTCCACTTCCTCTTGCAGGCTTAACCCAAACAAAAACAACCCCACCAATGACACCATCATCGACGTGGACAAAAACTCCATTGCAAGAAAAGATAACAAGCTTGATGGCTACTTCAATTACAACAACAACAACCACAATGATGACACCTTCTCAGAACTCGAGCTTCCTCCAATCATAACCAACTTAAAGAAGAGAGAACTCAAACAAGGGTCATTGAAGGTGAGAAATGTGAAGGAAGACTCTGCAATGTTGAAGGAACAGAGGCACAGTTCTGTGAGGAGATTCTCTGTGAGTTCTCCCGGGGTGAGATTGAGAATCCACTCGCCGAGAATTGCCGGAATGAAGGGGCGGAAAAGCGTGTCGTCCACGGCGAGTTCCGGCTCCCGGAGAAGCCTCTCCGATAGCTTTGCGGTTGTTAAGTCATCATTTGACCCACAAAAGGATTTCAGAGAGTCCATGGTGGAGATGATTGTGGAGAACAACATAAGAGCATCCAAGGACTTGGAAGATTTACTTGCTTGCTACCTTTCTCTTAATTCAGATGAGTATCATGATCTCATCATCAAAGTGTTCAAGCAAATTTGGTTTAATTTGACACAATCAAGGTAA 1107 0.4381 MGNHKFRLSDMIPNAWFYKLRDMGRRRKQNTTPSGKKKQTSSPSTTPSSKPNQPHHQYNNSRKSYYITRDLTPTINNKLHASPSNTPKIPPPRKSYKQRTKRRTPKVVSSGCSCRTTLDTVWTKSDSPQEHSSSSPFDTSPESQSPEFSRTDCVLPCSSFDEMVSLSTSSCRLNPNKNNPTNDTIIDVDKNSIARKDNKLDGYFNYNNNNHNDDTFSELELPPIITNLKKRELKQGSLKVRNVKEDSAMLKEQRHSSVRRFSVSSPGVRLRIHSPRIAGMKGRKSVSSTASSGSRRSLSDSFAVVKSSFDPQKDFRESMVEMIVENNIRASKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFNLTQSR 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00309 368 ProSiteProfiles OVATE domain profile. 304 363 IPR006458 -
Pste6g00309 368 MobiDBLite consensus disorder prediction 22 62 - -
Pste6g00309 368 MobiDBLite consensus disorder prediction 75 111 - -
Pste6g00309 368 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 73 366 IPR038933 GO:0045892
Pste6g00309 368 MobiDBLite consensus disorder prediction 34 62 - -
Pste6g00309 368 Pfam DNA-binding domain 1 42 IPR025830 GO:0003677
Pste6g00309 368 NCBIfam uncharacterized plant-specific domain TIGR01568 302 365 IPR006458 -
Pste6g00309 368 MobiDBLite consensus disorder prediction 123 148 - -
Pste6g00309 368 Pfam Transcriptional repressor, ovate 308 364 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00309 Pste-Chr6 1035035 1036141 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pste6g00309 Ovate 8.3e-25 No_clan