Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00300 ATGATGGGTAATCACAGGTTTAGATTATCAGATATGATTCCAAATGCCTGGTTTTACAAGCTGAGGGACATGGGGAGCGGAAGAAAGAAAAGCACCACATCCTCTAGGAAAAAGAAGCAATCTTCTTCCCCTTCAACAACACAATCATCAAAACCAAACCAACCCTTACCCCACAAATACCATCAATACAACAACCCCAGAAAATCCTATTACTTCACAAGAGACCTTACTCAAAACAACATCAAACTCCACACCTCACCTTCAAACACCCCAAAAGTTTCCCCTCCTAGAAAATCATACAAACAAAGAACCAAAAGAAAAACCCCAAAACTTGTCTCCTCAAGTTGTAGCTGCCCCACCACCCTTGAATCTGTGTGGACCAAATCAGATTCACCTCAAGAACTCTCTTCCTCTTCCCCATTTGACACCTCCCCCGAGTCACAATCACCAGAATTCAGAACAGATCGTGTTCTCCCATGTTCTTCATCATTTGATGAAATGGTTTCCTTGTCCACCACCTCTTGCAGGTTTAACATAAACAAAAACAACCCCACCAATGACACCATCATCGCCGTGGACAAAAACTCCATAGCAAGAAAAGACAACAAGCTTGAAGGCTACTACAATTACAACTACCACCACCACAACAACCACTATGACGACACTTTACCAGGACTCAAGCTTCCTCCAATCATAACCAAGTTAAAGAAGAGAGAACTCAAACAAGGGTCAGTGAAGGTGAGAATTGTTAAGGAAGACTCTGCAATGTTGAAGGAACAAAGGCACAGTTCTGTGAGGAGATTTTCTGTGAGTTCTCCCGGGGTGAGATTAAGGGTCCACTCACCGAGGATTGCCGGCCGGAAGGGGCGGAGAAGTGTGTCGTCGAAGGCGACTTCGGGCTCCCGGAGAAGCCTCTCCGGTAGCTTTGCGGTGGTGAAGTCATCATTTGACCCACAGAAAGATTTCAAAGAGTCTATGGTGGAGATGATTGTGGAGAAGAACATAAGAGCATCCAAGGACTTGGAAGATCTACTTGCTTGCTACCTTTCTCTTAATTCAGATGAGTATCATGACCTCATCATCAAAGTGTTCAAGCAAATTTGGTTTGATTTAACTCTACCAAGTTAG 1128 0.4397 MMGNHRFRLSDMIPNAWFYKLRDMGSGRKKSTTSSRKKKQSSSPSTTQSSKPNQPLPHKYHQYNNPRKSYYFTRDLTQNNIKLHTSPSNTPKVSPPRKSYKQRTKRKTPKLVSSSCSCPTTLESVWTKSDSPQELSSSSPFDTSPESQSPEFRTDRVLPCSSSFDEMVSLSTTSCRFNINKNNPTNDTIIAVDKNSIARKDNKLEGYYNYNYHHHNNHYDDTLPGLKLPPIITKLKKRELKQGSVKVRIVKEDSAMLKEQRHSSVRRFSVSSPGVRLRVHSPRIAGRKGRRSVSSKATSGSRRSLSGSFAVVKSSFDPQKDFKESMVEMIVEKNIRASKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTLPS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00300 375 Pfam Transcriptional repressor, ovate 315 371 IPR006458 -
Pste6g00300 375 MobiDBLite consensus disorder prediction 81 97 - -
Pste6g00300 375 NCBIfam uncharacterized plant-specific domain TIGR01568 309 372 IPR006458 -
Pste6g00300 375 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 42 371 IPR038933 GO:0045892
Pste6g00300 375 MobiDBLite consensus disorder prediction 81 154 - -
Pste6g00300 375 Pfam DNA-binding domain 2 43 IPR025830 GO:0003677
Pste6g00300 375 MobiDBLite consensus disorder prediction 25 64 - -
Pste6g00300 375 MobiDBLite consensus disorder prediction 109 154 - -
Pste6g00300 375 ProSiteProfiles OVATE domain profile. 311 370 IPR006458 -
Pste6g00300 375 MobiDBLite consensus disorder prediction 37 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00300 Pste-Chr6 1010730 1011857 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pste6g00300 Ovate 2.4e-24 No_clan