Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00295 TTTCCTTCATCCACAAAACCAAATCCTTAAAGCTTGATTGAGATTAATTTAAGAGTTGTTGTTTGATCTTTCCTCTCCTAAATCAAAATCCATTCAACCCTTTTCCTCCTTAGATTTTCCCCACCTTTTCTAATCCGACTTTTTTATTTGCATCTCTCACATCCACAAATGCTTTTCTCAAAGAATGGCCGTAGATTCTTCAAATTCAGAAGCCTGGTTTCATGTCCATGTCTTTTATACAGTCTTATCAATTTTTTATAACCTTTTAATCCTTGTCAAAATCCCCTCCTCCACAAGTATCTTCAACCAAAGTTCTCATTAGCCTTTTGGCTCAACACTCACAATCTTTGGTGTGACCTTATTGCGGGACAAGACACCATAATCATTGGTTTTTAATCCACACAACACAGTTTCCTTTGTCTCACTACAAAAATATCTCTCGAAAAGAGTGGCACCTCTTCCCATTGCCACTCTTCCTATTTAATCCAAGTTCTTCACATCAAGATTGTTCAAAGTTAACACCAATGGTTTACAAGCACTTCTACGAGCTTTCATGTGGAGTTGTTGAAATGGCTTGGATTATGCTTAGTGTTGACTATTCAAGGCTCTTGTGGCAATTATTTGGAGTGTTTTCTTATGAGAACCATGAATGGAAGCCTCGGATCATCTAGCACACACCTTATTCAGTTGAGTCAGATAGGTTACATATATAATATGTTGTTTTAATTTGTTGCTAAATTTTCAATTCCAGTAGCTGTAAGAATTACATATAATACACACGTGCCGGTTAAGTCAGAAATTGTGGTGACTGGTGAGTGATCCAGCCACAGCAAGAGCTAGCCATGTATAAGGGGAGATTAGGAGGCAAAGCTCAGCTTGGATATGTTGAAACTGACCCTTCTGGTCGATATGGACGTTTCAGGGACATTCTGGGCAAAGGAGCAGTGAAGGTAGTGTACAGGGCATTTGATGAGGTGCTAGGAATAGAGGTGGCTTGGAACCAAGTAAAGCTTGGTCATGTGTTTCATTCACCAGATCTGCTTCAGCGACTTTATTCAGAGGTTCATCTCCTCAAGAACTTGGAAAATGACTCTATCATGACCTTCCATGATTCTTGGATTGATGTCAATTGTAGAACCTTCAACTTCATCACTGAATTGTTCACCTCTGGCACCCTAAGAGAGTATAGAAAGAAGTACCAACGAGTAGATATCAGAGCAGTGAAGAATTGGGCACGCCAGATTCTAAGTGGTTTGGAGTATTTACACAGCCATGATCCTCCTGTGATACATAGAGACCTCAAGTGTGACAATATCTTCATCAATGGCCATTTGGGTCAGGTGAAGATTGGTGATTTGGGCCTTGCAGCCATTCTCCGTGGCTCCCAACATGCCCACAGTTTATTAGTAATCTTAGCTAAAACTTGTGTACACAAAGTTGAAGTACACCAGAATTTATGGCACCGGAATTGTATGAAGAGGAATACAATGAACTGGTTGACATATACTCCTTTGGGATGTGATAAACTTTTCTTAGCGTGTCAGGATCAAATTCCATTTCACAGAAAGCAAAATTCAACTAAAAAATTGTTATCTGACCAGATGAAATTGGCTATATGGATCAATCTAAGAGAGATATTATATGCTTTGAAACAAAATCAATTTTTTTTTCCAACACAAAAAATTCATTTGACATATTTGATTGATTTGATTCAACAGGGGAAACTGCCAAAAGCCTTTTACAGGATCAATGACTTGGAAGCCCAGAGATTTGTGGGAAAATGTTTGGCAAATGTCTCAGAGAGGCTGTCAGCAAAGGAGCTCTTGTTGGACCCATTTTTAGCCACGGTACAACTAGACTCTCCATTGTCCAGCCCAACATTACCCAGAAAACAAACCCCCACACTCAATTTCACTGCATCATTTGCCAAAGAGCTACCTCCAATGATTGACAAAACAAAGGACACAAACATGACAATCACTGGATCCATGAATGAAGAGGATGACACAGTTTTCCTTAAAGTACAGATTTCTACTAAAAGTGGGCAAAAGAGAAACGTATACTTTCCATTTGACATCATAAATGACACTGCTATTGATGTGGCAATGGAGATGGTTAAAGAATTGGAAATTAGTGATTTGAAACCATTGGAGATTGCTGAAATGATTGGGGAAGAGATATCTGCTTTAGTCCCAACATGGAGGGATTGGAGCAGTAATAAGTATAAAAAACAACATAGTTTTAGCTATGAAGAAGAGTATGATATGAGTAACCACCCTTTCCTCTCACCATCTTCTCGCTCTTCCTCTCATAGTTCTCTTCCAATGTTTGGTTCTGTCTACAAGAGTAATTCCCACCTTCATGGGAACCATTGCCCTTGTGCTCAAGATTGGCCTCAAGAAGAACTATTTATGAATGATGATGAAAGCTCTCAAAGCTCAATGAACTCCATCAAGTGTTTCAATTTCCAGTGCTGCGACCCCAGCAACGAAGATGAGCATGATCCAACTTTAGCAAAAGCCACAAGATTCTGTCCTAGAGAAGAAGTGATGGATGTTGATTTCACCAAACAGTTTTGTAACTTGAGAATGGATTCTAAAAGGTGTCATGGAATGCACAAGCTAACCAGGATTCGTTCCTTTGTGGATGTGAGGAGACAACAACTGCAACTATCACTGATGGAAGAGATTTACAAGAAGAGGATGGCCAAAACGGTTGGTGCCGTTGAGAACATTGGGTTTCAGAATCCACAAGGTGGATGTTTTTCTTGTTAAAGCTCCATGGATTCCAATGCTCCTTTCTCTTTTTAACTTCTTCTACTTTGGGGTCTTTATTTTATTTGTTTTATTATTTAAGGGTGTTTATTTATTACATGAATTACGATGTCCAAGAATATTTGTATACCACACGGACAATATGAATATTGCAAAATATTGTGAAATAAAAATTGTAATATATTTTAATCCATGCTTATGTTAAAATATGTTTGCT 2991 0.3855 MYKGRLGGKAQLGYVETDPSGRYGRFRDILGKGAVKVVYRAFDEVLGIEVAWNQVKLGHVFHSPDLLQRLYSEVHLLKNLENDSIMTFHDSWIDVNCRTFNFITELFTSGTLREYRKKYQRVDIRAVKNWARQILSGLEYLHSHDPPVIHRDLKCDNIFINGHLGQVKIGDLGLAAILRGSQHAHSLLVILAKTCVHKVEVHQNLWHRNCMKRNTMNWLTYTPLGCDKLFLACQDQIPFHRKQNSTKKLLSDQMKLAIWINLREILYALKQNQFFFPTQKIHLTYLIDLIQQGKLPKAFYRINDLEAQRFVGKCLANVSERLSAKELLLDPFLATVQLDSPLSSPTLPRKQTPTLNFTASFAKELPPMIDKTKDTNMTITGSMNEEDDTVFLKVQISTKSGQKRNVYFPFDIINDTAIDVAMEMVKELEISDLKPLEIAEMIGEEISALVPTWRDWSSNKYKKQHSFSYEEEYDMSNHPFLSPSSRSSSHSSLPMFGSVYKSNSHLHGNHCPCAQDWPQEELFMNDDESSQSSMNSIKCFNFQCCDPSNEDEHDPTLAKATRFCPREEVMDVDFTKQFCNLRMDSKRCHGMHKLTRIRSFVDVRRQQLQLSLMEEIYKKRMAKTVGAVENIGFQNPQGGCFSC 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00295 643 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Pste6g00295 643 Pfam Protein kinase domain 28 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00295 643 ProSiteProfiles Protein kinase domain profile. 24 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00295 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Pste6g00295 643 Gene3D Transferase(Phosphotransferase) domain 1 107 338 - -
Pste6g00295 643 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Pste6g00295 643 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 187 - -
Pste6g00295 643 SMART serkin_6 24 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00295 643 SUPERFAMILY Protein kinase-like (PK-like) 25 352 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00295 Pste-Chr6 990812 996702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00295 14 455 MAP Kinase Kinase Kinase AT3G22420 42.888 7.80e-108 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pste6g00295 Pkinase 4.8e-28 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01855 5 11726264 11732875 Pste6g00295 6 990812 996702 PCT