Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00294 atgatttcgtttgttcttaacgctagtcccaatacatggttagggttaccgcgttacattcgaagtttcttgagtctttcttgtggtggaagaaccagttttaaggattcatccaacatttcatgggtacctgacaccacttacattaacacaggcaagactactgccatcacttacaatgatggttcctcttcattgaacatctcagcaagattcttctcaaattcccaaaggagaaaatgttacagaataccagcatacaattcaaccacttcggttcttgttagagcaaaatttgtgtacaagaactatgatggacatgggaaaccccccatgttctctgtttctgttggaacagctattgctgcaaccataaatcttgctgaatatgatccatggagtgaagagtttctatggactgtcaacaaggataccctatcattctgcttaaatgcaattccaaaaggtggttcacctgtaatttcttccctggaaatcagaccacttcctcaaggagcctacacaaatggcatggcggattttcctaataagttgctaaggaagagttatagaattgattgtggacgctccaatgattctataaggtatcccttggatccatttgatagaatatgggatgctgatagaagtttcacaccctttcatgttgcaattgggtttaagattcaacttggcttcaaacactctaaacttgtagaagaaccaccagtagcagttcttcaaactgggagagttttggctcgaacaaatacactcacatacaacctccttcttgatgcattaggggactactacatcatcctctactttgctggaattcttcctgtattcccctcctttgatgtccttataaatggagaactagtaaaatcaaactacacaataaatagcacagaaaccagtgctttatacataacaaaaaagggaattggaagcctgaatataaccttaaagagtatcagcttttaccctcagatcaatgcatttgaggtttataaaatggttgatattccatctgatgcctcctcaaccacagtttcagcactgcaagttattcaacaatccactggattagatcttggatggcaggatgatccatgccttccttccccatgggataaaattgactgtgaaggaagccttgttacatcattggatttgcacaacacatcgcttactggagaaatacagaatttggatggcttgcaacatcttgagaaactgaacctgagttacaatcaactaacatctattggcgcagatatggaaaacttgattaatcttcaaatattagacttgcagaacaataatttaatgggagtagtacctgatagcttgggagagttagaggatctccacttactgaatctggaaaacaacaaactacaaggtccactaccacagtctttgaacaaagaaacattagagataaggacatctggtaatttgtgtcttaccttttccacgacatcatgtgatgatggatcatccaatcctccaattgaggcaccacaagtcactgtagttcctcagaagaagcacaatgtacataaccatctattattaatactaggcatggttggaggagccacactagcctttttcttagtgtgtatttcagtattgatatacaagactaaacagcaatatgaactctcccacgtatcaaaagcagaactggatatgaggaattggggtggtgcaaaagtcttttcctacaaagaaatcaaagcagctacaaggaacttcaaagaagtcttaggaaggggtagttttggatctgtttatctgggaaaactttcagatggaaaatctgtcgctgtcaaagttcggtttgacaaatctcaacttggtgctgattctttcatcaatgaggttaatcttttgtcaaaaatccggcatcaaaatcttgtgtccttggaaggattttgccatgaaagaaagcatcagatattagtctatgagtacttgcctggtggatccttagctgatcatctttatggattggattatttgcataatggaagtgaaccaagaatcatacatcgtgatgttaagtgcagtaacattctcttggacatggacatgaatgccaaggtctgtgatttaggtctctctaagcaagtcactcaagaagatgcaactcatgtcaccactgttgtcaaaggcactgctggttacctagatccagagtattattccactcaacagttgacagagaaaagtgatgtatatagttttggagttgttattttggaactcatttgtggaagagagccattaactcactctggaactcctgactcattcaatttggtgttatgggccaagccatatttgcaggctgatgcatttgagatagtagatgaggacataagaggaacttttgatcccttgagtatgaggaaggcagctttaattgctataaagtcagtggagagagatgcatcacagaggccatctattgcagaggttttagcagagctaaaggaagcctacaatattcagctcacattccttgaatcttgccaaaatgataattgttaa 2568 0.0 MISFVLNASPNTWLGLPRYIRSFLSLSCGGRTSFKDSSNISWVPDTTYINTGKTTAITYNDGSSSLNISARFFSNSQRRKCYRIPAYNSTTSVLVRAKFVYKNYDGHGKPPMFSVSVGTAIAATINLAEYDPWSEEFLWTVNKDTLSFCLNAIPKGGSPVISSLEIRPLPQGAYTNGMADFPNKLLRKSYRIDCGRSNDSIRYPLDPFDRIWDADRSFTPFHVAIGFKIQLGFKHSKLVEEPPVAVLQTGRVLARTNTLTYNLLLDALGDYYIILYFAGILPVFPSFDVLINGELVKSNYTINSTETSALYITKKGIGSLNITLKSISFYPQINAFEVYKMVDIPSDASSTTVSALQVIQQSTGLDLGWQDDPCLPSPWDKIDCEGSLVTSLDLHNTSLTGEIQNLDGLQHLEKLNLSYNQLTSIGADMENLINLQILDLQNNNLMGVVPDSLGELEDLHLLNLENNKLQGPLPQSLNKETLEIRTSGNLCLTFSTTSCDDGSSNPPIEAPQVTVVPQKKHNVHNHLLLILGMVGGATLAFFLVCISVLIYKTKQQYELSHVSKAELDMRNWGGAKVFSYKEIKAATRNFKEVLGRGSFGSVYLGKLSDGKSVAVKVRFDKSQLGADSFINEVNLLSKIRHQNLVSLEGFCHERKHQILVYEYLPGGSLADHLYGLDYLHNGSEPRIIHRDVKCSNILLDMDMNAKVCDLGLSKQVTQEDATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVILELICGREPLTHSGTPDSFNLVLWAKPYLQADAFEIVDEDIRGTFDPLSMRKAALIAIKSVERDASQRPSIAEVLAELKEAYNIQLTFLESCQNDNC 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00294 855 Gene3D Ribonuclease Inhibitor 351 501 IPR032675 -
Pste6g00294 855 Pfam Protein kinase domain 590 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00294 855 ProSiteProfiles Leucine-rich repeat profile. 411 432 IPR001611 GO:0005515
Pste6g00294 855 Pfam Leucine rich repeat 411 469 IPR001611 GO:0005515
Pste6g00294 855 Gene3D Transferase(Phosphotransferase) domain 1 659 851 - -
Pste6g00294 855 Gene3D Phosphorylase Kinase; domain 1 560 658 - -
Pste6g00294 855 SUPERFAMILY Protein kinase-like (PK-like) 574 839 IPR011009 -
Pste6g00294 855 SMART LRR_typ_2 409 431 IPR003591 -
Pste6g00294 855 SMART LRR_typ_2 432 455 IPR003591 -
Pste6g00294 855 Pfam Malectin-like domain 26 341 IPR024788 -
Pste6g00294 855 SUPERFAMILY L domain-like 354 479 - -
Pste6g00294 855 PANTHER OS07G0107800 PROTEIN-RELATED 424 840 - -
Pste6g00294 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 687 699 IPR008271 GO:0004672|GO:0006468
Pste6g00294 855 ProSiteProfiles Protein kinase domain profile. 588 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00294 855 ProSitePatterns Protein kinases ATP-binding region signature. 594 616 IPR017441 GO:0005524
Pste6g00294 855 Gene3D - 188 343 - -
Pste6g00294 855 SMART serkin_6 588 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00294 855 FunFam serine/threonine-protein kinase PBS1-like 556 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00294 Pste-Chr6 978701 991023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00294 23 849 Receptor kinase-like Gene Family AT5G48740 58.877 0.0 1016
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pste6g00294 Malectin_like 5.3e-52 CL0202