Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00290 GGGAAGGTCTCGATCTCACCAACTAAGGGAAGGAGGTGGCAGGGTATAATTGGTGGATGGAGTTGGCGGGGTTGGTGAGGGATTGAACCGAACCCATCCTTACTTTTGCTTAAAAAGTAGGAGTCCAGGCCTTCATCCTTACTAACAAGTCTCCAACAAGCATTACATGTTTTTGTGAAATCATAATCAAGGTGGCATTGACAGGAACAGGATGATAATCGAGGTGAAGGAATCGACGATGGTGAGGCCGGCAGAGGAGGTGAGGCGGCGGCTGGTGTGGAACTCGAACGTGGACCTGGTGGTTCCCAATTTCCACACCCCAAGCGTCTACTTCTATAGGCCAAACGGTGCCTGCAACTTCTTCGATGCCAATATTCTCAAGGAGGCACTAAGCAAGGTACTCGTCCCCTTCTACCCAATGGCTGGCCGCCTCCGCCGAGACGACGACGGTCGCGTCGAGATTGATTGCCACGGCCAAGGTGTTCTCTTCGTCCAGGCCCACACCTCCTCCCTCATTCACGACTTCGGTGACTTCGCTCCCACCCTTCACCTCCGCCAGCTCATCCCCTCTGTCGATTATTCTAAACCCATTCAAACCTATCCCCTCTTGCTCTTGCAGGTAACACGTTTCAAATGTGGAGGTGTGTCACTGGGAGTTGGTATGCAACATCATGTAGCAGATGGAGCCTCTGGTCTTCACTTCATCAATACATGGTCAGATGTGGCTCGTGGCCTGGATGTTTCCATTCCACCATTCATTGATAGGACAATACTTCGTGCCAGAGATCCACCTCGACCCGTATTTGATCACATTGAATACAAGCCTCCACCAGCCATGAAGACTCAACAACAACCCACTAAACCAGGTTCAGAGTCAGATACTGCAGCAGTCTCTATTTTCAAACTGACACGTGACCAACTCAACACACTGAAAGCTAAGTCCAAAGAAGATGGCAACACCATCACCTACAGCTCTTATGAGATGTTGGCAGGTCATGTATGGAGAAGTGTATGCAAAGCAAGAGCACTTCCTGACGACCAAGAAACTAAGTTGTACATTGCAACCGATGGAAGGTCAAGGTTGCAACCTTCTCCCCCACCAGGTTACTTTGGCAATGTGATATTCACAACCACACCTATAGCTGTGGCAGGTGATCTCATGTCAAAACCAACTTGGTATGCTGCAAGCAGAATCCATAATGCATTGTTACGAATGGACAACGATTATTTAAGATCAGCTCTTGACTATCTAGAGCTGCAACCTGATCTAAAAGCTCTGGTTCGTGGGGCACATACTTTCAAGTGTCCTAATCTTGGTATCACTAGCTGGACTCGACTTCCAATCCATGATGCTGACTTTGGTTGGGGAAGGCCAATATTCATGGGACCTGGTGGCATTGCATACGAGGGTCTATCTTTCATAATTCCAAGCTCAAACAATGATGGGAGCTTATCTGTGGCAATAGCTCTTCAACCCGAGCATATGAAGGTGTTCAAGGATTTCTTGTATGACATTTGAGGAATCATGGCTGCCAGCCATATAAAACGCCACAACGTTTCTAGGTGGCGTTTTATTTCCACGTCCCCTTTGTTATCGTTAGATGCTTTTGAAAAACAGTATACTTTTTCAATAGATTACATTCCTCGGAAGTGTTATAATCTGTAAACATGTATGGACTTTAAAAACAATCAATTTGATGTTACAGCTTCTCTAAGATTTGTTTAAGGATTGTCTGCACAAGCTTTTGTTCC 1752 0.4663 MIIEVKESTMVRPAEEVRRRLVWNSNVDLVVPNFHTPSVYFYRPNGACNFFDANILKEALSKVLVPFYPMAGRLRRDDDGRVEIDCHGQGVLFVQAHTSSLIHDFGDFAPTLHLRQLIPSVDYSKPIQTYPLLLLQVTRFKCGGVSLGVGMQHHVADGASGLHFINTWSDVARGLDVSIPPFIDRTILRARDPPRPVFDHIEYKPPPAMKTQQQPTKPGSESDTAAVSIFKLTRDQLNTLKAKSKEDGNTITYSSYEMLAGHVWRSVCKARALPDDQETKLYIATDGRSRLQPSPPPGYFGNVIFTTTPIAVAGDLMSKPTWYAASRIHNALLRMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWTRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSNNDGSLSVAIALQPEHMKVFKDFLYDI 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00290 435 Gene3D - 1 205 IPR023213 -
Pste6g00290 435 Gene3D - 217 435 IPR023213 -
Pste6g00290 435 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 432 - -
Pste6g00290 435 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
Pste6g00290 435 FunFam Tryptamine hydroxycinnamoyl transferase 210 433 - -
Pste6g00290 435 Pfam Transferase family 2 430 - -
Pste6g00290 435 MobiDBLite consensus disorder prediction 200 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00290 Pste-Chr6 967009 971068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00290 1 435 Monolignol Biosynthesis Gene Families AT5G48930 76.782 0.0 705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03794 3 30179452 30184390 Pste6g00290 6 967009 971068 PCT