Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00275 GAAGGGGAAGGGGAAGGGGAATTTGAAAAAGGGAAGGGAGGAGAAGATCTGAGGGAGGGAGAGAATGGAGGAGAAATACGAGAAACTGGAGAAGGTAGGAGAAGGGACGTACGGGAAAGTGTACAAGGCAAGGGAGAAAGGGAGTGGGAAATTGGTGGCGCTGAAGAAGACGAGGCTGGAAATGGACGAGGAGGGGGTACCACCGACAGCACTAAGAGAGGTCTCTCTCCTTCAGCTGCTATCGCAATCCCTCTACATAGTCAGATTACTATCGGTGGAGCACGTGGATAAGATACCCAAAGCCCACAAGGCCTCTGGGAACCCTAACCCCCAAACAAAGCCCGTACTATATCTGGTATTCGAGTACCTTGACACCGATCTCAAGAAATTCATCGATTCCCACCGCAAGGGCCCCAACCCTCGACCACTCCCTCACTCCCTCGTACAGAGCTTCCTCTTCCAGCTATGCAAAGGTGTCGCCCACTGCCACAGCCACGGCGTCCTACACCGCGATCTCAAGCCTCAGAACCTTCTTCTCGATCACCACAAAGGCATTCTCAAGATCGCCGATCTCGGCCTGGCCCGCGCCTTCACCGTCCCTCTCAAGTCCTACACTCACGAGATCGTCACTCTCTGGTACCGTGCCCCCGAGGTTCTCCTTGGCTCCACCCATTACTCCACCGCCGTTGACATCTGGTCCGTTGGCTGCATCTTTGCTGAAATGGTCCGTCGCCAACCTCTCTTTCCCGGCGACTCTGAGTTCCAGCAACTCATTCACATTTTCAGGATCTTGGGCACCCCTACCGAGCACCTCTGGCCTGGCGTCACTTCTCTCCGTGATTGGCATCTCTATCCCACCTGGCCACCTCAGTCCTTGGACTCCAATCTCCCCTCCTTATGCCCTCTCGGCCTCGACCTTCTCTCGAAAATGCTCAAATATAATCCTTCTGAGAGAATATCTGCCAAGTCAGCGCTTGATCATCCCTACTTTGACAGTCTTGACAAGTCTCAGTTTTAGTTCTGCCTCCACCACAAGTCTCTGTTAATCAATACTTTAACTATCAGTCGATGCAAAATCCATCGTTTGGACTTTAAATACATGTCTAATTCAGCTTCTGTAATATTTACTCATCATCTTGGTCATCTGAACAGTTCACTTCTAAGGACTGTTCATGGTTTCCATGCTCTTTCTTTGAAGAACCTCGAATATGCCTATGATATTAGCTATCCTTGTGCGTAATATCTTATAGCCTTTTTAGATTGCTCATTTTTTCTGTTGAAATTGCAAGGTATAGCATATGACTATGATATTGACTATCCTGTCGCATATAATATCTTATCATTAACTATCATAGTGCA 1359 0.4901 MEEKYEKLEKVGEGTYGKVYKAREKGSGKLVALKKTRLEMDEEGVPPTALREVSLLQLLSQSLYIVRLLSVEHVDKIPKAHKASGNPNPQTKPVLYLVFEYLDTDLKKFIDSHRKGPNPRPLPHSLVQSFLFQLCKGVAHCHSHGVLHRDLKPQNLLLDHHKGILKIADLGLARAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMVRRQPLFPGDSEFQQLIHIFRILGTPTEHLWPGVTSLRDWHLYPTWPPQSLDSNLPSLCPLGLDLLSKMLKYNPSERISAKSALDHPYFDSLDKSQF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00275 317 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Pste6g00275 317 PANTHER CELL DIVISION PROTEIN KINASE 3 309 - -
Pste6g00275 317 Gene3D Transferase(Phosphotransferase) domain 1 104 316 - -
Pste6g00275 317 Gene3D Phosphorylase Kinase; domain 1 1 103 - -
Pste6g00275 317 FunFam Cyclin-dependent kinase B2,2 1 103 - -
Pste6g00275 317 SMART serkin_6 5 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00275 317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Pste6g00275 317 SUPERFAMILY Protein kinase-like (PK-like) 3 312 IPR011009 -
Pste6g00275 317 FunFam Cyclin-dependent kinase 2 105 316 - -
Pste6g00275 317 ProSiteProfiles Protein kinase domain profile. 5 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00275 317 Pfam Protein kinase domain 5 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00275 Pste-Chr6 926382 927915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00275 3 317 Core Cell Cycle Gene Families AT3G54180 80.000 0.0 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Pste6g00275 Pkinase 3.3e-66 CL0016