Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00257 atggcaagcattgcaactgatttggcaaagtcaattttggagaaattgatagatgcaacagtaacacaatcacgatacatttgttgcttcagttctattgctgaggactttgaaaaggaaaaggaaacattgaaagcaagaagcagtgatgtgggagaatatgttcaagcggcaaaaaacaacggggaaagcataagaagtgaggtcaagcattggcaagagcaagcagaaaaacttatcaaagagtactcaaaaacaaaagagacatgcttttttgggtggtgtcctaattgcaaatggagatatattagaggaaaggatcttgaaaataagtctaaggaaattagaggactcttagaccaaagtgggaattacaataaagatgttgttggaatccatcgtcagatacctggtgctgaatctgcttctcctcaagattacatgtctttcgaaagtagaaaattgactcacaaaaaacttttggatgccctgacaaatgacaagaattatatgactggattgcatgggatggggggcacaggtaaaacaacattagcaaaaaaagttggtgttgagcttgaaaattccaaaaagtttaatcatgttattattactacaatatcttcgactccgaacataaaaaagattcaagatgaaattgcaggaccattgggattatcgtttaaggattgtactgatgcggagaggccccaaatattgtggaatagattgataaatggtgagaaaattcttataatacttgatgatgtatggggagatatcaattttgaagaaataggtattccacgaaaagacaatcacagtggttgcaaaatacttgttaccactcgcgatctaaagatatgtaacaaaatgaaatgtgatagcaaaattcaacttgatctcttatcagaggaagatgcatggatgttgttccaaatgcattctggtataagtcagagtccctctaaaagtatcctagacctgggacgtgaaattgccaaagaatgcaaaggattaccggttgcaatagccgttatcgcaagcaatttgtatggcgaaaatagccttgaacgatggaaagtagccttagaatccttgcagaacttcgcatcccaatatagtgaggatgaaaatttggataaaattcataaatgtttgaagtatagctatgacaatatgaagaacgaaaaggataagagactatttcttttatgctctctcttcccagaagatgaagaaatttctgttgaaattttaaccagatgttttgtaggagcaggtcttgttgaagaaactcacaacaattatgacgcatgtcgaaatcaagttgttttagcaaaagataaactcatagattcatgtttattgttgaaggctcaggagggaaatgtaaaaatgcatgacttggtacgtgaagtggccttaacaattgctagcaaggagattcaagcgatcaatatttctaaccaaaacaaaaattcattggatggaaggacatctaatccaaagtatttggtatgtgaagtcaatgacaaggatgtgatctccttcaagtttgatagatctaaacttgagattctaattgtctacatggatgtagacataattgattctacaaaagtttcaaattctttctttgaaaatatgacagggcttcgagttttgtttttatcatctaagacttcaacttcaccttggcgacgtttcataagaatatcgttatcacaatttgttaagtcattgacgaatattcgatctttgatccttgaaggctttaacttagatgaaggtacacttaatgtagttaatcttaatttaaaaagtatgccacagctagagtgccttgttgataacaagcatattgattcgcgtatgcaaaatgtcttctccaagttggctgaactagaactttgtaatatgaaatatttgagggaactgtgtagtggttcccttcctgtccaacttttccaaagtttagagacgttgttgataagtgattgtacacatttacaaggcatattgtttaagagcaacttatccctctgtaatcttgtgtccttgactttgaggagctgtccaatgttgacatctgtttttcatctatcaaacacacaaaacctagtgttgttggagaagttggttatagatgattgtggtcagctaaaaaacatatttcattttggtggtgataatgagaataggagtattggttttaagtttctaaatttaagatctcttgaaatccaagcatgtcccaagttagattttatccttccaattgttgctgctcaagatgttccaaaattggaacttatccaaattgttgactgtgctgacctgaaatatatattttatccgtaccaacgtaaacatggtgaacaagattgtcctcaagagcttaaggatgctatacttgttatgctaaaggaagtgacactagaaaacttgccaaaatttgttgacatttttccaagatgtgataagttcaagtgttcatctatggaaagttctaaaatactacccaagcttgaatttttgattgttgttgaagcatgtatgctagaggaagtgttcaaatgtggaagtgatcaaaaagttgaaattccaaatctaaaagttgcagcatttgtgaaacttccaagcctttgcaaggatattgatgactttcacgctgtaaaggatcgtttggtgttgaattgtccaaaattctctttgacttcaacattaacacctgagaggatcgaagaaacttttgctggcatcgaagggactgattatacaaatgatataaaggacttattaaagaacattattgaattttatgaagacactacagaggaagagtctgacaagcagctggaagagtctgacaagcagcttttggcaggaagtgaactcagatcatcacagatcaccaccgccaccaattgtgagggtggtgatactggcaatggtggcgacaatggtaagggtgacgatagcagcggcagtggctgtggcaatggagatgataaaggagaaaaagccataacttctgtttctgatgacaatatagaacctggaaccaccaaagacgttgaagatgaagactttcatcataaggaaaatttcaattctgtaattaccccatctggtaccaattttccagggtttgaaaatctaccaatcaaggatattgatgatcagaatgaagactgcaaaatccatgagactgaagactttccaattgagactaaagctcaagcaacatcagggagtgaattaatttcatcacagggtttcagccacatcaatggtcgaaatggggttccttatatgataaacgtagttgaagtccaaaatatcctaggaccacctatgtgcttgatcttgcttgctagtaataaggaaaagaatgaaggacaaaaatccataacttctgtttctgattacaatatagaacctgatatccccaaaaatgttgaagatggagactttaaggaaactttgaagtctgtaattaccccatctgagatcaatgcaccagggtttgaagtaagaaaccttgatgatcagtatgaacactctaaagcccgtgagactagcaatcagaatcaaaatgaaaatgctatcgagaaccttccaattgagactaaagctaaagcaacatcacagattgaattaatttcattacaggatattgacaataaaataattctggagacaactgtggcaaaagaaccaacaccacaagctaaagaaaaagaatcaacatttaattcagtagatggacaatcatcttcaagttcatctgaagataaacaagaagtccaaggtagcttaaaaaataattcacaaataccttgttttgactttaatcaaggaaataaagatttgaactcctcaacccctgcactcagtgaacatcttaacaaatatcatatccaagttgatagcaacaaactcaacaacatggggattctgaaatacactcctattaacattgatgattgtcagaaatatcttgatgatgatccatttgtgctgttggatttttttccacgagagatttcattgtcatccacgcaatccaaaaccaaggtggaggaatcttcaatgactgaaacattagcctctgcactggataaccttcgacagctcacattctccctaccaatgctggagaatattggtaaggttgagtacagagaaaaggctgaagctgttattaggaaacttgagatgtttcctaatgatattgaccaagaccttgatgagagaatcagatctttcatcaagttttttgaaaaagctgtcgaagtttgtcaaaagaaatcttcgactattgaactgattaagcaagttgatggtgagaagaaagaagcactggaaaaattacaaagaaccaaagataaagtgtgtgagcttgatgaggttattgagaaatataagccagaacttgaaaacattgaaaagcgccaaagagagcttaaggatacaatgaagaaagtccaggaagaattgaatgagttgggaagagacaaagaaaaaattgagtctgcgagcaccaaatattcttcaaagaaagcagaacttattgaatcagccaagtatatttcggatgccataataagaaatttcaaacatttgactgaccttgaggagaacaaggccatacatgatgcagattttgaagccttaaaagagccttacaacaagatgaaggtcaatcctcctttttaa 4725 0.0 MASIATDLAKSILEKLIDATVTQSRYICCFSSIAEDFEKEKETLKARSSDVGEYVQAAKNNGESIRSEVKHWQEQAEKLIKEYSKTKETCFFGWCPNCKWRYIRGKDLENKSKEIRGLLDQSGNYNKDVVGIHRQIPGAESASPQDYMSFESRKLTHKKLLDALTNDKNYMTGLHGMGGTGKTTLAKKVGVELENSKKFNHVIITTISSTPNIKKIQDEIAGPLGLSFKDCTDAERPQILWNRLINGEKILIILDDVWGDINFEEIGIPRKDNHSGCKILVTTRDLKICNKMKCDSKIQLDLLSEEDAWMLFQMHSGISQSPSKSILDLGREIAKECKGLPVAIAVIASNLYGENSLERWKVALESLQNFASQYSEDENLDKIHKCLKYSYDNMKNEKDKRLFLLCSLFPEDEEISVEILTRCFVGAGLVEETHNNYDACRNQVVLAKDKLIDSCLLLKAQEGNVKMHDLVREVALTIASKEIQAINISNQNKNSLDGRTSNPKYLVCEVNDKDVISFKFDRSKLEILIVYMDVDIIDSTKVSNSFFENMTGLRVLFLSSKTSTSPWRRFIRISLSQFVKSLTNIRSLILEGFNLDEGTLNVVNLNLKSMPQLECLVDNKHIDSRMQNVFSKLAELELCNMKYLRELCSGSLPVQLFQSLETLLISDCTHLQGILFKSNLSLCNLVSLTLRSCPMLTSVFHLSNTQNLVLLEKLVIDDCGQLKNIFHFGGDNENRSIGFKFLNLRSLEIQACPKLDFILPIVAAQDVPKLELIQIVDCADLKYIFYPYQRKHGEQDCPQELKDAILVMLKEVTLENLPKFVDIFPRCDKFKCSSMESSKILPKLEFLIVVEACMLEEVFKCGSDQKVEIPNLKVAAFVKLPSLCKDIDDFHAVKDRLVLNCPKFSLTSTLTPERIEETFAGIEGTDYTNDIKDLLKNIIEFYEDTTEEESDKQLEESDKQLLAGSELRSSQITTATNCEGGDTGNGGDNGKGDDSSGSGCGNGDDKGEKAITSVSDDNIEPGTTKDVEDEDFHHKENFNSVITPSGTNFPGFENLPIKDIDDQNEDCKIHETEDFPIETKAQATSGSELISSQGFSHINGRNGVPYMINVVEVQNILGPPMCLILLASNKEKNEGQKSITSVSDYNIEPDIPKNVEDGDFKETLKSVITPSEINAPGFEVRNLDDQYEHSKARETSNQNQNENAIENLPIETKAKATSQIELISLQDIDNKIILETTVAKEPTPQAKEKESTFNSVDGQSSSSSSEDKQEVQGSLKNNSQIPCFDFNQGNKDLNSSTPALSEHLNKYHIQVDSNKLNNMGILKYTPINIDDCQKYLDDDPFVLLDFFPREISLSSTQSKTKVEESSMTETLASALDNLRQLTFSLPMLENIGKVEYREKAEAVIRKLEMFPNDIDQDLDERIRSFIKFFEKAVEVCQKKSSTIELIKQVDGEKKEALEKLQRTKDKVCELDEVIEKYKPELENIEKRQRELKDTMKKVQEELNELGRDKEKIESASTKYSSKKAELIESAKYISDAIIRNFKHLTDLEENKAIHDADFEALKEPYNKMKVNPPF 1574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00257 1574 FunFam Probable disease resistance protein At1g61300 135 297 - -
Pste6g00257 1574 MobiDBLite consensus disorder prediction 1021 1037 - -
Pste6g00257 1574 Coils Coil 1474 1515 - -
Pste6g00257 1574 SUPERFAMILY L domain-like 466 785 - -
Pste6g00257 1574 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 406 IPR027417 -
Pste6g00257 1574 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 31 785 - -
Pste6g00257 1574 Coils Coil 55 89 - -
Pste6g00257 1574 MobiDBLite consensus disorder prediction 946 1059 - -
Pste6g00257 1574 Gene3D - 134 299 IPR027417 -
Pste6g00257 1574 Gene3D - 302 395 IPR042197 -
Pste6g00257 1574 PRINTS Disease resistance protein signature 244 258 - -
Pste6g00257 1574 PRINTS Disease resistance protein signature 171 186 - -
Pste6g00257 1574 PRINTS Disease resistance protein signature 337 351 - -
Pste6g00257 1574 PRINTS Disease resistance protein signature 655 671 - -
Pste6g00257 1574 MobiDBLite consensus disorder prediction 963 996 - -
Pste6g00257 1574 Pfam NB-ARC domain 159 393 IPR002182 GO:0043531
Pste6g00257 1574 MobiDBLite consensus disorder prediction 1248 1281 - -
Pste6g00257 1574 Coils Coil 1446 1466 - -
Pste6g00257 1574 MobiDBLite consensus disorder prediction 1242 1281 - -
Pste6g00257 1574 Gene3D Ribonuclease Inhibitor 517 847 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00257 Pste-Chr6 859205 874156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00257 172 840 WRKY Transcription Factor Family AT5G45050 22.670 8.86e-14 75.1