Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00253 TTGAAGTATAACCACATGTTATACCCATTTTAGCTGCACTCTGAGTTGTATGAGCTCCTATCTTATAGGAGGGTTAAAGTTCCATCTTTTGGGTTTATTATATTCATATGATTTGAACCCTATTGTGTTTCAAAGTTTACTGCAAAAACAATTCTATTCAACAGCTGAATTGTGTACACGGGATGGGGTGTTTCACTGTCTTGAAAATCAAGAAGAGAAGGATCAATAAAATTGCATATTCAAAATATGTTAGCCATTATGAACATGTTCCTACAGTACTGCCTGAACCTCAAACTCGTATTGGTTCCCTACAGTCTGCACCTGCTAGTTTTAGGAATAGAGAGAAATCTATTCACCCTATTACTAAAGTTACCAATAACAGAACACGGACAATATCTGCTCCATCAGCCCTTGATGTAGCGAATCTAGATACTCTTACCACAGTTGAGTTAGAGGAACAAGAAGAATCAAGATACCAAGTTGAATCAGTGAAGGAGCAGCGTTCATCCATTCCACAACCTTTACCTCTTCCATCTTGTCAGCGTGATGGTACATTGAAAGCTACTATCAGCTTTAAGTCAGGGATGGCTACTGGTTCTATATATGCTTATGGACCAGCTCCTGATGCACCAGAACAAGATGCTTTGGCCTCAGTTGAGTATGACGAAGAAGAGTCGAAACACCAAGTTGGATTGATGAAGGAGCAATACTCATCTAATCCACAACCTTTGCCACTTCCTTCTCATCTGGGTGGTGGTGGCATATTGAAGGCTAATGACAGTTTTAAGTTAGGGACAGCCAGTGTTCGTGGACCTTTGCCTCTTCCACCAACTGGGTTGATTAGAAACTTTACATTTGAGGAAATTGCTGCTGCTTGCCACAACTTCTCTTCAGATCGATGCATGTCAGAACGGTTTTCTTCTACCATATATAGTGCTTCATTTGGTGATGATGCTTCAAGTGCAAAGAAGTTTGAAGCCTCTGTCACTCGCCTTCATTCATCAACTCAGGGATTGAAGGAATTCATAAATGATGTTACTACCCTTGCATCTTTGCCACATCCAAATCTCTGTAAATTGCTAGGATTTCATGCACGTGATGGTTCTGAACCAAGGATGTTGGTTTATGAGAGGCTATGCCATGGAAGTTTGGATTGCCTGTTGTTTGGGAGATCTAATGGCCCTTCTATTGATTGGAACTCACGAATGAAAATTGCCATATGTGCTGCACAAGGTCTTACTTTCTTGCACGAAGAAGGGCCTTTCCAGGCAATGTATAATGAATTTTCAGCAGCCAACATCCAGATTGATAAAGACTTCAGTGCAAAGCTTTCTGGATATGGTTGTGTTGGACGCATTACTGAGGACGAGATTTCATGCAGTTCATCTGCTGTTGGAAACCTGTCAGTGGAGACACTGGAAAGAGGAATTCTTACTCCAAAGAGCAACGTATGGAGTTTTGGAATTATTCTTTTGGAGCTACTTACTGGCAGAAAGAATCTTGACAGCCACCACCCCAAGGAAGAGAAGAACTTAGTGAAGTGGAGTCGGCCTTTCCTGGCTGATGATTTCCGACTGTCGCTGATTATGGATCCTCAACTTAAAGGTCGCTTTCCTCCCAAAGCAGCTAGAGCAGTAGCTGACATTGCACAAAGATGCCTCCAAAAGGAGCCATCAGAAAGACCCACCATAAGAACCATTGTCAAGCATCTCAAAATGGTACAAGATATGAAGTACTCTTGTTGGTTCCCACTGCAAGAGCCAGCAAAACAAATGTCAAGATCACCAAGTCTTAATGGTATCATATGTCATGCACCCACGTTGAGTTTCTCTCCTTCAGCACCATCAGTAACCAGACCATCCGTTTCACTTCCAAGATGGTTTGCTGTGCCTGCACTGCATCTTCCTCTTCGCGCTTGTTCCTCTACTTTCTCTATGGAGGAGCTAGGTAGTGCCAGAAAGCAGGAAGTCATCATCCTCAACGTGTAGAAGAGCTCTTGGCTGTCTATAATGTTCATTTTTTATTATACTGTTATTATCATTTTTGGGTGATTCAACACAAGTGTATAGGAGATAAAGGTGTCTTCTTCTAACCTTTCCATTTCTATTTCTCTCCATGAGAAGATGCTCTTTTGTAGATAGTGC 2144 0.4174 MGCFTVLKIKKRRINKIAYSKYVSHYEHVPTVLPEPQTRIGSLQSAPASFRNREKSIHPITKVTNNRTRTISAPSALDVANLDTLTTVELEEQEESRYQVESVKEQRSSIPQPLPLPSCQRDGTLKATISFKSGMATGSIYAYGPAPDAPEQDALASVEYDEEESKHQVGLMKEQYSSNPQPLPLPSHLGGGGILKANDSFKLGTASVRGPLPLPPTGLIRNFTFEEIAAACHNFSSDRCMSERFSSTIYSASFGDDASSAKKFEASVTRLHSSTQGLKEFINDVTTLASLPHPNLCKLLGFHARDGSEPRMLVYERLCHGSLDCLLFGRSNGPSIDWNSRMKIAICAAQGLTFLHEEGPFQAMYNEFSAANIQIDKDFSAKLSGYGCVGRITEDEISCSSSAVGNLSVETLERGILTPKSNVWSFGIILLELLTGRKNLDSHHPKEEKNLVKWSRPFLADDFRLSLIMDPQLKGRFPPKAARAVADIAQRCLQKEPSERPTIRTIVKHLKMVQDMKYSCWFPLQEPAKQMSRSPSLNGIICHAPTLSFSPSAPSVTRPSVSLPRWFAVPALHLPLRACSSTFSMEELGSARKQEVIILNV 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00253 601 Gene3D Phosphorylase Kinase; domain 1 216 316 - -
Pste6g00253 601 PANTHER OS01G0588500 PROTEIN-RELATED 168 514 - -
Pste6g00253 601 ProSiteProfiles Protein kinase domain profile. 243 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g00253 601 Pfam Protein tyrosine and serine/threonine kinase 260 510 IPR001245 GO:0004672|GO:0006468
Pste6g00253 601 Gene3D Transferase(Phosphotransferase) domain 1 319 521 - -
Pste6g00253 601 MobiDBLite consensus disorder prediction 99 121 - -
Pste6g00253 601 SUPERFAMILY Protein kinase-like (PK-like) 215 521 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00253 Pste-Chr6 850347 854245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00253 202 514 Receptor kinase-like Gene Family AT4G02010 36.677 1.30e-53 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Pste6g00253 PK_Tyr_Ser-Thr 1.3e-24 CL0016