Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00242 GAGCTTTCAAACTTCCAGCCCTGCTTTTTGTTGCCTTCCAGTTCAAGTTTTCAAATGTTAGGGATTCATTAGGATTTGAAGAGTTCACTTATGCATCAGATCTCCAGATCAAAGGCAAATTATGTTGATGCAGAACTATCTGCTTTTAAGGAGAGGAACTTCTTGATGGCAACCAAGTTGATCTGAATTTAAATCTTCCAAGAAGCTTTTTAATATCCGCATATAACCACTTCAATGAGAACATCCAAATTTCCTTGTAAGGGATTGGATTATCGTCTATGCCTTCTGATTTTTGCTGTATGTTTGGTGTTGTATGGAACAGTTTCAAGATTGAATGCTCCAAATGTTTCTTATGCCTCAGTATCTAAGTTACGGCACGCCAATCCTAAGCATATTATATCAAAAGGGAAAGGGTACCCTCCAGTGCTCGCATATTGGATTCTTGGCACCAAAGAAGAGAGTAAGAAGATGTTCAGGCTGTTGAAGGCTTTATACCATCCAAGAAATCAGTACCTACTTCAGCTCGATGATCGTTCCTCTGAGTCTGAAAGAATGGATTTAGCTATTTCAGTTAAATCCCTTACGGTGTTTCAGGAATTTGGAAATGTGAATGTCGTTGGGAAAAGTTATGCCATCAATAGGATGGGATCTTCTGCTCTTTCTGCTCCTCTGCATGCTGCTGCTTTGCTTCTTAAACTGAAACCAGATTGGGACTGGTTCATCACCTTGAGTGCTTCAGATTATCCTCTCATGACTCAGGATGATATCCTTTATGCTTTGACATTCTTGCCAAAATATGTCAACTTCATTCATTACACTAACAAGACGGTTCGAAACGAGCAACGAGACATTAACCAAATTGTGGTAGACCAAAGTTTACATTATGAAAAGAGTAGTCCACTTTTCTTTGCTGTGGAGTCCAGAGATACTCCAGATGCTTTTAAGCTATTTCGAGGTTCACCCTGGATGATTCTTACAAGAGCCTTTATGGAGTACTGTGTAAGAGGGTGGGACAATTTACCAAGAAAACTTCTAATGTTCTTCAGCAATGTGGCTTATCCCCTGGAATCATATTTCCATACAGTGTTATGCAACTCTCATGATTTCCAAAACACCACTGTGGACAATAATCTAATGTACAGTCTTTGGGACACCGATCCGTCTGAATCCCAATTGCTTGATATGTCATACTATGATACAATGCTGGAAAGTGGGGCTGCATTTGCTCGCCCATTTGGCGAAGGTGATGTGGTTCTGGAAAAAATTGATGATTTGATTCTTAACCCATCATCTAATGGGTTGGTTCACGGGGAGTGGTGTTCAAACTCTGAAAAAAATAAGACTACAAATGTTTCAAAAGCTGAGGAAGAGTTCTGCTCACAATCTGGTAATATTGATGCTGTAAAACCAGGGCCGTTTGGCATCAAGCTTAAAACTCTACTAGCTGAAATTGTGAACACAAGAAAATTCAGAACTAGCCAGTGCAAATCCTTTGGAAAGTCGTAACAAAATAGAGTGTTGCAAAGACCACTTTGAAAATGGATCTTTTCATCCACGCTAACTGAATGAATGAAACTGGCTTTATGAGATTGCCATATTTTTTAGGCCTGGGAGTTTGGAACATAAGATTCTATATTGTGTTTGCTAAAAGCTCTACTTGGG 1662 0.3947 MRTSKFPCKGLDYRLCLLIFAVCLVLYGTVSRLNAPNVSYASVSKLRHANPKHIISKGKGYPPVLAYWILGTKEESKKMFRLLKALYHPRNQYLLQLDDRSSESERMDLAISVKSLTVFQEFGNVNVVGKSYAINRMGSSALSAPLHAAALLLKLKPDWDWFITLSASDYPLMTQDDILYALTFLPKYVNFIHYTNKTVRNEQRDINQIVVDQSLHYEKSSPLFFAVESRDTPDAFKLFRGSPWMILTRAFMEYCVRGWDNLPRKLLMFFSNVAYPLESYFHTVLCNSHDFQNTTVDNNLMYSLWDTDPSESQLLDMSYYDTMLESGAAFARPFGEGDVVLEKIDDLILNPSSNGLVHGEWCSNSEKNKTTNVSKAEEEFCSQSGNIDAVKPGPFGIKLKTLLAEIVNTRKFRTSQCKSFGKS 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00242 423 Pfam Core-2/I-Branching enzyme 65 307 IPR003406 GO:0016020|GO:0016757
Pste6g00242 423 PANTHER GLYCOSYLTRANSFERASE 24 417 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00242 Pste-Chr6 820175 822789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00242 55 418 Glycosyltransferase AT1G71070 43.014 8.97e-106 317