Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00237 GTTCTTGTAAGGAGATAGTAGCTTTTTGCAAATTAATGAAGAGCTCCACTGAATGCATTGCTACATTCTAGAGATTACTCTCATGAAGCAAGTGCAGTTCATCCTAATACTCCTATCAGTATTTCATGTTCTTTTTGGTCCAATCCAAGTGATCTCCATAGACCCTTTCAACGATGATGTGTCGGGGTTGATTATGTTCAAGGCTGGTCTAGAGGACCCAAAAGGTAAACTCTCTACGTGGAATGAAGAGGATTATAGCCCCTGCGACTGGGTTGGTGTCAAATGTGACCCTGCAACCCATAGAGTATCTTCTCTTGTTCTTGATGGATTCTCTCTATCTGGTCACATTGATAGAGGCCTATTGAGATTGCCTTTCCTTCAGATTCTGTCCCTCGCTAGGAACAACTTCACTGGGACCATAGCTACTGATCTTCTCAGTATTGGTGATTTACAAGTTGTTGATTTGAGTGAGAACAACCTCTCTGGGCCAATCCCAGATGGGACTTTCCAGCAATGTTGGTCGCTAAGAGTAGTCTCATTTGCCAACAACAACCTCACAGGTAAGATTCCTGATTCTTTGAGCTCTTGTTACAAATTGGCGGTTGTGAATTTTTCCTCTAATCATCTGCATGGGGAACTACCTTCTGGAATGTGGTTTTTGACTGAACTACAGTCAGTTGATGTTTCAAACAATTTTCTAGAGGGAGAGATTCCAGAAGGAATTAAGAATCTCATTAATTTAAGGGAGCTGAGGCTAGGGAGGAACCACTTCACTGGTAGAATTCCAGAGAATATGGGAAACTACTGTTTTCTTTTGAAGTTGGTTGATTTCAGTGGTAATTTTCTCTCTGGGAGACTTCCTGAGTCAATGCAAAAACTCACCTCATGCACATTCCTCAGCTTGCAAGGGAATTCATTCACAGGTGGTATTCCACATTGGATTGGAGGAATGAAAAGTCTTGATATATTGGATCTTTCAGCAAATAGATTTTCTGGTTGGATTCCAAATTCAGTAGGAAATCTTGACTTGCTGAGTAGGTTGAATTTGTCAAGGAATCAGATCACAGGAAATCTGCCAGAGTCAATGGTAAATTGCATTAAGCTTTTGACTCTTGACGTCAGCCACAATCACTTGGCAGGCCATCTTCCTTCATGGCTATTTAGGATGGGCTTACAAAGTATCTCTCTTTCCGGGAATACCTATAGCAAGAGCAGTTATCACTCATTTACTTCCATTCCGGTATCTTTTCATGGACTTCAAGTTTTGGATTTGTCATCAAATGCATTTTCTGGAAAACTTCCATCTGGAATTGGAGGTCTTGGTAGCTTGAAAGTCTTGAATTTGTCCACTAACAATATCTCAGGTTCTATTCCTATCAGTATTGGAGAACTTAAGTCTTTGTACATTCTTGACTTAAGTGACAACAAGCTTAATGGAAGCATTCCTTCTGAAATAGAAGGGGCAATTTCACTCAGTGAAATGAGGCTACAAAAAAACTTCTTAGGAGGAAGAATTCCAGCCCAAATAGAGAAGTGTTCAGAACTAACATTTCTGAATCTTTCTCACAACAAGCTTATTGGTTCAATCCCTTCAGCTGTTGCAAACCTAACCTATCTTCAGTATGTAGATTTGTCATGGAATGAACTCTCTGGAAGCTTACCCAAGGAGTTGACAAACCTTTCCCAGCTTTTCTCATTTAATGTTTCATACAATCACCTTCAAGGTGAGCTACCAGTGGGTGGTTTCTTCAATACTATCTCTCCTTCATCAGTCTCTGGTAATTCATTGCTATGTGGTTCGGTTGTTAATCACTCTTGCCCTTCTGTTCATCCAAAGCCTATTGTCTTAAACCCCAATTCTTCTTACTCTAACTCCGGCTCTTCCTTACAAAACCATCACCATAAGATGATACTTAGTATCTCTGTCCTTATTGCTATTGGTGCTGCTATTTTTATTGTCATCGGTGTGGCGGTTGTTACTGTCTTAAATATCCATGTGAGGTCTTCAATGTCACCTTCTGCTGCTCCTTTTGTATTCTCTGGTGGTGAGGACTATAGTGGTTCACCCCCGAATGATGCAAACTATGGCAAGCTTGTGATGTTTTCTGGTGATGCTGAATTTGCTGAAGGTGCTCATAATCTTCTTAACAAAGACAGTGAAATTGGCCGTGGTGGATTTGGAGTAGTTTATTGCACTGTTCTTAGAGATGGTCATTGTGTTGCAATCAAGAAGCTTACAGTGTCCACTTTGACCAAGTCCCAAGAAGACTTTGAGAGGGAGGTTAAAATGCTTGGAAAGATCAAGCATCAAAATCTTGTGGCACTTGAAGGTTATTATTGGACTCCATCCTTGCAGCTCCTAATTTATGAGTATCTATCCAGAGGGAGTTTGCAAAAACTTCTACATGATGATGATAGTTGCAAGAATGTGCTTCCTTGGAGACAAAGGTTCAAGATCATTCTTGGAATGGCAAAAGGGTTGGCCTATTTGCACCAAATGGAGGTAATTCATTACAATCTAAAATCAACCAATGTTTTCATAGATTGTTCTGATGAGGCAAAGATAGGCGACTTTGGCTTGCTGAGGCTATTGCCAATGCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGTGCACTTGGATACATGGCTCCTGAGTTTGCTTGCCGCACAGTTAAGATAACCGAGAAATGTGACATTTATAGTTTTGGAATTTTGATTTTGGAGGTGGTGACAGGAAAAAGACCTGTGGAATACATGGAGGATGATGTGGTTGTTCTTTGTGACAAGGTGAGGAGTGCATTGGATGATGGCAAAGTGGAGCAATGTGTTGATGAGAAGCTGAAGGGTAATTTTGCTGCAGAGGAAGCAATTCCTGTGATAAAATTGGGGTTGGTTTGTGCATCACAAGTACCCTCAAACCGTCCAGATATGTCTGAGGTAATCAACATATTAGAATTGATCCAATGCCCCTCAGAAGGACTTGAAGAATTACAT 2998 0.4066 MHCYILEITLMKQVQFILILLSVFHVLFGPIQVISIDPFNDDVSGLIMFKAGLEDPKGKLSTWNEEDYSPCDWVGVKCDPATHRVSSLVLDGFSLSGHIDRGLLRLPFLQILSLARNNFTGTIATDLLSIGDLQVVDLSENNLSGPIPDGTFQQCWSLRVVSFANNNLTGKIPDSLSSCYKLAVVNFSSNHLHGELPSGMWFLTELQSVDVSNNFLEGEIPEGIKNLINLRELRLGRNHFTGRIPENMGNYCFLLKLVDFSGNFLSGRLPESMQKLTSCTFLSLQGNSFTGGIPHWIGGMKSLDILDLSANRFSGWIPNSVGNLDLLSRLNLSRNQITGNLPESMVNCIKLLTLDVSHNHLAGHLPSWLFRMGLQSISLSGNTYSKSSYHSFTSIPVSFHGLQVLDLSSNAFSGKLPSGIGGLGSLKVLNLSTNNISGSIPISIGELKSLYILDLSDNKLNGSIPSEIEGAISLSEMRLQKNFLGGRIPAQIEKCSELTFLNLSHNKLIGSIPSAVANLTYLQYVDLSWNELSGSLPKELTNLSQLFSFNVSYNHLQGELPVGGFFNTISPSSVSGNSLLCGSVVNHSCPSVHPKPIVLNPNSSYSNSGSSLQNHHHKMILSISVLIAIGAAIFIVIGVAVVTVLNIHVRSSMSPSAAPFVFSGGEDYSGSPPNDANYGKLVMFSGDAEFAEGAHNLLNKDSEIGRGGFGVVYCTVLRDGHCVAIKKLTVSTLTKSQEDFEREVKMLGKIKHQNLVALEGYYWTPSLQLLIYEYLSRGSLQKLLHDDDSCKNVLPWRQRFKIILGMAKGLAYLHQMEVIHYNLKSTNVFIDCSDEAKIGDFGLLRLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDIYSFGILILEVVTGKRPVEYMEDDVVVLCDKVRSALDDGKVEQCVDEKLKGNFAAEEAIPVIKLGLVCASQVPSNRPDMSEVINILELIQCPSEGLEELH 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00237 982 SUPERFAMILY RNI-like 259 567 - -
Pste6g00237 982 Gene3D Phosphorylase Kinase; domain 1 676 774 - -
Pste6g00237 982 Pfam Protein tyrosine and serine/threonine kinase 699 966 IPR001245 GO:0004672|GO:0006468
Pste6g00237 982 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 40 319 - -
Pste6g00237 982 SUPERFAMILY Protein kinase-like (PK-like) 695 974 IPR011009 -
Pste6g00237 982 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 254 969 - -
Pste6g00237 982 Pfam Leucine Rich Repeat 206 227 IPR001611 GO:0005515
Pste6g00237 982 Gene3D Ribonuclease Inhibitor 319 595 IPR032675 -
Pste6g00237 982 Pfam Leucine rich repeat 282 337 IPR001611 GO:0005515
Pste6g00237 982 Pfam Leucine rich repeat 401 460 IPR001611 GO:0005515
Pste6g00237 982 Gene3D Transferase(Phosphotransferase) domain 1 775 977 - -
Pste6g00237 982 CDD STKc_IRAK 704 971 - -
Pste6g00237 982 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 320 593 - -
Pste6g00237 982 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 775 977 - -
Pste6g00237 982 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Pste6g00237 982 Gene3D Ribonuclease Inhibitor 39 318 IPR032675 -
Pste6g00237 982 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 692 774 - -
Pste6g00237 982 ProSitePatterns Protein kinases ATP-binding region signature. 704 727 IPR017441 GO:0005524
Pste6g00237 982 SUPERFAMILY L domain-like 60 319 - -
Pste6g00237 982 SMART LRR_typ_2 399 423 IPR003591 -
Pste6g00237 982 SMART LRR_typ_2 349 372 IPR003591 -
Pste6g00237 982 SMART LRR_typ_2 227 251 IPR003591 -
Pste6g00237 982 SMART LRR_typ_2 203 226 IPR003591 -
Pste6g00237 982 SMART LRR_typ_2 519 542 IPR003591 -
Pste6g00237 982 SMART LRR_typ_2 300 323 IPR003591 -
Pste6g00237 982 SMART LRR_typ_2 543 567 IPR003591 -
Pste6g00237 982 SMART LRR_typ_2 130 154 IPR003591 -
Pste6g00237 982 SMART LRR_typ_2 447 471 IPR003591 -
Pste6g00237 982 SMART LRR_typ_2 324 348 IPR003591 -
Pste6g00237 982 ProSiteProfiles Protein kinase domain profile. 698 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00237 Pste-Chr6 792856 796041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00237 10 981 Receptor kinase-like Gene Family AT3G56370 58.487 0.0 1084
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Pste6g00237 PK_Tyr_Ser-Thr 1.5e-42 CL0016