Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00217 ATGGCAAAAGGTCTTGTTTGGGTGTTGTATTTTTACTTTTTAGAAGAATGTGTGTCCTGGTCCTGGGTGGGATATTGTTGTCCATCAAAAAACATAACAAAACCGAGCGCTACTCTAGCATCGCCACACATTAGCCCAGGGCTTACAATTCATTGATAATTTTGTTAATTTTTTACTTCTGATTTTTAATTATTAATTTAATTAGTTGATATATTTAATTTTCTGAATAATTGTTATTATTTATCAAACTGATTTGGGTGGAATTGGAGGTGTGTGGCCCTGCCATTTGCATTTCCCACGCAGTGAGCATTTGAAATCGCTGTTCTTGTTGGGAAGCAAAGGCAACCGCGTCCATGAACGGCCACCTCACCGTAACCATCGCTAACAGGAACCCTGACGGCGATGACGTCCTCCCTCCCTTCGACGAGGACCGCACCAACAACAACATCAACCACCACGACAATGACGACGACGAAGAACTCGTGGATCCTGATGATCCTTTTGATATTACTCAAACTAAGAATGCATCGCACGAGACGCTTCGCCGTTGGAGACAAGCAGCACTCGTGCTCAATGCGTCCAGGCGTTTTAGATATACTTTGGACTTGAGAAAGGAAGAAGAGAAAGAGCAAAAGAAACACTTGATTAGAGCCCATGCACAAGTCATAAGAGCAGCACTGCTTTTCAGATTGGCTGGTGAACGTGAACTAGTGATAAGTACAGCAGTGACACCCCCAACTCCAGTTGGTGACTATGATATTGGGCTCGAACAGCTTATTAGAGGCTTATCAAATTTAATAAAATCTAATCCGGATAAGGGTATTAGTGGAGATGATGCTGATCTGTTAAAAAGGAAAAATGCATTTGGAACTAATACATATCCTCGAAAAAAGGGAAGAAGTTTCTGGAGATTTTTATGGGAAGCTTGGCAAGATCTGACTCTCATAATATTGATAATAGCTGCTGCAGTGTCATTGGCACTTGGAATAAAAACAGAGGGTTTGGAGGAAGGATGGTATGATGGGGGAAGCATTGCTTTTGCAGTTATTAGAGGTGGGAGAACAATTAAAATGTCAATATTTGATATTGTTGTTGGTGATGTTATTCCCCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAGTATTAATCACGGGCCATTCACTAGCAATTGATGAATCCAGTATGACTGGTGAAAGCAAGATTGTTCATAAGGATCACAAAGCACCATTTTTTATGTCTGGTTGCAAAGTAGCTGATGGAGTTGGTGTTATGCTGGTAACTGGTGTTGGTATAAATACTGAATGGGGATTGTTGATGGCAAGCATCTCTGAGGATACTGGAGAAGAGACTCCGTTACAGGTACGTTTGAATGGAGTAGCAACTTTTATTGGTGTAGTTGGGCTTACTGTAGCTGTTTTAGTGCTTGCTGTCCTCTTGGGCAGATACTTTTCTGGCCATACCAAAGATGTATCTGGAAATGTCGAATTTGTTGCGGGAAAGACTAGTGTTAGCAATGCAGTAGATGGTGTCATAAAAATTTTTACCATTGCTGTCACAATTGTGGTTGTTGCAGTGCCTGAAGGTCTACCTTTGGCTGTTACCTTAACCTTGGCATACTCAATGCGGAAAATGATGGCAGACAAGGCCTTGGTACGACGGCTATCAGCTTGTGAAACTATGGGCTCAGCTACTACAATTTGCAGTGATAAGACAGGAACATTGACTTTAAATCAGATGACTGTAGTTGAGGCATATATTGGGAGGACGAAAGGAAATCCACCAGATGACTCATCAAAGTTGCATCCAAAAGCATTGTCTCTGATAAATGAGGGTATTGCCCAGAATACAACGGGAAATGTTTTTGTGCCTAAGGATGGCGGAGAGACAGAGGTGTCTGGATCTCCTACTGAGAAGGCAATTCTTTCATGGGCAGTCAAGTTGGGTATGAATTTTGATGTTATCAGATCAAACTCGACAGTTCTCCATGTCTTCCCCTTCAATTCTGAGAAAAAGAGAGGCGGTGTCGCTTTGAAGCTGGGGGATTCTGGAATACATATACATTGGAAGGGAGCTGCAGAGATAGTTCTAGGAACATGTACTCAATATCTTGATTCAGATGCACAATTGCAATCCATTGAAGAGGAGAAGGCCTTTTTTAAGGAAGCTATTGATGACATGGCTGCTCGCAGCTTGCGTTGTGTTGCCATTGCATACAGATCATATGAGTTGGACAAAGTTCCATCTAATGAGCAGGATTTAGACCAATGGTCCTTACCAGAACATGAGCTTGTTTTGCTTGCTATTGTGGGAATAAAGGATCCTTGTCGCTCTGGTGTTAAAGATGCTGTAAAAGTATGCACTGATGCTGGTGTTAAGGTACGCATGGTTACTGGAGACAACCTTCAAACAGCAAAGGCAATAGCTTTGGAGTGTGGCATACTGGCATCAAATGAAGATGCTGTTGAGCCAAATATAATTGAAGGAAAAAAATTCCGTGAACTATCTGAAAAGGAAAGAGAAGATATTGCCAAGAAAATAACTGTGATGGGTAGGTCTTCTCCTAATGACAAGCTTCTGCTTGTGCAAGCGCTACGTAGAGGAGGGGAAGTTGTTGCTGTCACAGGAGATGGCACCAATGATGCTCCTGCACTTCACGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGCTCGGATATTATAATCCTAGATGACAACTTTGCATCAGTAGTGAAGGTTGTTCGCTGGGGCCGCTCTGTATATGCGAATATTCAGAAATTTATCCAGTTCCAGCTTACCGTTAATGTTGCTGCTCTTGTAATAAATGTTGTGGCAGCAATAACTTCTGGTGATGTTCCTTTAAATGCAGTACAGCTTTTGTGGGTCAATCTTATCATGGATACACTTGGAGCGCTTGCACTGGCCACTGAACCACCAACTGACCGCCTAATGCGCAGATCACCAGTTGGCCGAAGTGAAAGTATTCTACCTAGCCAACCTACTAGAGCTGAGGACTTTCAAGTGAAGAATACTTTAATATTCAACGCGTTCGTCCTGTGCCAAATATTCAATGAATTCAATGCTCGGAAACCGGATGAAATGAATGTTTTCCGTGGAGTGACGAAGAACCGTCTTTTCATGGGGATTGTCGGAGTGACTTTTATACTTCAGATAATCATCATCGAGTTGCTTGGAAAGTTCACCTCAACAGTGAAGCTCGATTGGAAGCTATGGCTTGCTTCTATTGGTATTGGCATTGTCAGCTGGCCCCTTGCTATAGTCGGAAAATTCATTCCTGTTCCCAAAACACCATTGGCTCGTTACTTCTTGAAGCCAATCAGGCGATTTAAGAGGTCTAGGTCTCGTGCTATACAA 3398 0.4235 MNGHLTVTIANRNPDGDDVLPPFDEDRTNNNINHHDNDDDEELVDPDDPFDITQTKNASHETLRRWRQAALVLNASRRFRYTLDLRKEEEKEQKKHLIRAHAQVIRAALLFRLAGERELVISTAVTPPTPVGDYDIGLEQLIRGLSNLIKSNPDKGISGDDADLLKRKNAFGTNTYPRKKGRSFWRFLWEAWQDLTLIILIIAAAVSLALGIKTEGLEEGWYDGGSIAFAVIRGGRTIKMSIFDIVVGDVIPLKIGDQVPADGVLITGHSLAIDESSMTGESKIVHKDHKAPFFMSGCKVADGVGVMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGVVGLTVAVLVLAVLLGRYFSGHTKDVSGNVEFVAGKTSVSNAVDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYIGRTKGNPPDDSSKLHPKALSLINEGIAQNTTGNVFVPKDGGETEVSGSPTEKAILSWAVKLGMNFDVIRSNSTVLHVFPFNSEKKRGGVALKLGDSGIHIHWKGAAEIVLGTCTQYLDSDAQLQSIEEEKAFFKEAIDDMAARSLRCVAIAYRSYELDKVPSNEQDLDQWSLPEHELVLLAIVGIKDPCRSGVKDAVKVCTDAGVKVRMVTGDNLQTAKAIALECGILASNEDAVEPNIIEGKKFRELSEKEREDIAKKITVMGRSSPNDKLLLVQALRRGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAITSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDRLMRRSPVGRSESILPSQPTRAEDFQVKNTLIFNAFVLCQIFNEFNARKPDEMNVFRGVTKNRLFMGIVGVTFILQIIIIELLGKFTSTVKLDWKLWLASIGIGIVSWPLAIVGKFIPVPKTPLARYFLKPIRRFKRSRSRAIQ 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00217 1015 Gene3D - 769 889 - -
Pste6g00217 1015 Gene3D - 890 992 - -
Pste6g00217 1015 PANTHER CATION TRANSPORTING ATPASE 142 990 - -
Pste6g00217 1015 FunFam Calcium-transporting ATPase 222 326 - -
Pste6g00217 1015 FunFam Calcium-transporting ATPase 650 802 - -
Pste6g00217 1015 Pfam Cation transporting ATPase, C-terminus 896 987 IPR006068 -
Pste6g00217 1015 Pfam Cation transporting ATPase, C-terminus 842 886 IPR006068 -
Pste6g00217 1015 MobiDBLite consensus disorder prediction 18 39 - -
Pste6g00217 1015 SUPERFAMILY Calcium ATPase, transduction domain A 229 323 IPR008250 -
Pste6g00217 1015 SFLD C1.7: P-type atpase like 432 809 - -
Pste6g00217 1015 Gene3D - 502 659 IPR023299 GO:0000166
Pste6g00217 1015 Gene3D - 308 473 - -
Pste6g00217 1015 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Pste6g00217 1015 Pfam Cation transporter/ATPase, N-terminus 138 207 IPR004014 -
Pste6g00217 1015 SUPERFAMILY HAD-like 448 862 IPR036412 -
Pste6g00217 1015 FunFam Calcium-transporting ATPase 58 114 - -
Pste6g00217 1015 SUPERFAMILY Calcium ATPase, transmembrane domain M 144 990 IPR023298 -
Pste6g00217 1015 SFLD p-type atpase 432 809 IPR044492 -
Pste6g00217 1015 Pfam Ca2+-ATPase N terminal autoinhibitory domain 47 90 IPR024750 GO:0005516
Pste6g00217 1015 MobiDBLite consensus disorder prediction 1 42 - -
Pste6g00217 1015 SMART Cation_ATPase_N_a_2 141 212 IPR004014 -
Pste6g00217 1015 Coils Coil 592 612 - -
Pste6g00217 1015 FunFam Calcium-transporting ATPase 460 657 - -
Pste6g00217 1015 Gene3D - 228 307 - -
Pste6g00217 1015 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 457 654 IPR023299 GO:0000166
Pste6g00217 1015 Pfam E1-E2 ATPase 230 428 - -
Pste6g00217 1015 FunFam Calcium-transporting ATPase 9 plasma membrane-type 304 474 - -
Pste6g00217 1015 Gene3D - 58 112 - -
Pste6g00217 1015 Pfam haloacid dehalogenase-like hydrolase 447 771 - -
Pste6g00217 1015 PRINTS P-type cation-transporting ATPase superfamily signature 274 288 - -
Pste6g00217 1015 PRINTS P-type cation-transporting ATPase superfamily signature 650 661 - -
Pste6g00217 1015 PRINTS P-type cation-transporting ATPase superfamily signature 781 793 - -
Pste6g00217 1015 PRINTS P-type cation-transporting ATPase superfamily signature 672 682 - -
Pste6g00217 1015 PRINTS P-type cation-transporting ATPase superfamily signature 757 776 - -
Pste6g00217 1015 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Pste6g00217 1015 NCBIfam calcium-translocating P-type ATPase, PMCA-type 228 886 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pste6g00217 1015 NCBIfam HAD-IC family P-type ATPase 724 838 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste6g00217 1015 NCBIfam HAD-IC family P-type ATPase 385 477 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00217 Pste-Chr6 707313 726994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00217 35 1011 Primary Pumps ATPases AT3G21180 70.888 0.0 1481