Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00210 atgctaggcatagcaatcgatttggcaaagtcaattttggagaaattgatagatgcaacagtaagagaatcacaatatatttgttgcttcacatgtattgctgaggactttgaaaaggaaaaggaaactttaaaaggaaaaagcagtgctgtggggcaatatgttcaagtagcaaaaaacaatggcgaaagcatacgtagtgatgtcatacagtggcataaacaagttgaggatcttatcaatgaggacaccaaaacaaaagtgacatgcttttttgggtggtgtcctaattgcaaatggagatattctagaggaaaggatcttaaaactaagtctgaggaaatgaaaaggcacatcattgaaagtagcaattacattagcaatgttgttggaatccaacgtggtgttgcaggtgttgaatattattcttctcaagattacatttcatttgaaagtagaaagtcaagttacaaagaactttgggatgcgttgacaaactacaacaattatatgactggattgcaaggaatggggggcacaggtaaaacaatattagcaaaagaagttggtaaggagcttaaaaagtccaaaaagtttgatcatgttattgatactacagtatcttccactccagacataaaaaagattcaagacgatattgcaaagccattaggattatcatttaatgattgcactgaatcagagagacccaaaatattgtggagtagattgatcgatggtgagaaaattcttatcatacttgatgatgtgtggagagatatcaagtttgaacaaataggcattccattaaaggacaatcacaatggttgtaaaattcttgttaccacccgagatctaaagatatgtaacaaaatgaaatgtgatagaaaaattcaacttaatctcttaccagatgaagatgcatggacattgttcaaaatgcatgctggtataagtcagagttcctctgaaagtatcctagaagtgggtcggaaaattgtcaaagaatgcaaaggattacctgttgcaatagcagttatcgctaggagtttgaatggtgaagaaggccttgaagaatggaaattagccttagaagccttgcaaaattttataccccagcatggtgatgataaaaatttggatgaaattcataaatgtctaaagtatagctacgacaatatgaggaatgaaacggctaagagattgtttcttttatgctctatgttcccagaagatgaagaactttgtgctgaaattttactcagatgctctataggagcagttcttgttgaggaaattgataataattatgatggatgtcgaaatcaagtggttgtggcaaacaatatactcatagattcatgtttgttgttgaagactgaggaaggaagtgcaaaaatgcatgacttggttcgtgaggtggccttaattatagcaagcaatgagattcaagcaatgaatatttctaacaaaaacaaaaagtcattggatggaaggtacaatcctaaatatttggtatgtgaaggcaatggcatgtatcagatttcctccatgtttgatagatctaaacttcaaattctgattatctacgtggatggagacataactgattctgtagaaggcgcaagttcattctttgaaaatatgaccggacttcgagttttgtatttatcacgtaagactttgactaatagatcgttatcattgccacaatcaattaagtcattgaccaatattcaatctttgatccttgaaggatttgacttaggtgacatctctattgttggaaatctacaaagccttgaatctcttgatttggttagatgttctatgaatgaattgccctctgagattgaacaactgaagaaacttaaactgctgctcttgaaaaaatgttatattcgacagaataatccatttataattattggaaattgctcttcgttggaagaattacatttcgttgacaatcatatgtcaacaatacaccacaaaaacataaatcttcccaaattccacagattccatatagaatactttggaatgagagacaactcaccaatgaattccatgtattttgaaagggctgatgaaattttctctaaaacaacaatcaagcatctagtgggacaagttgaacttcttaatttgcaaacagggggatggagaaatatcatacctgagattattcagcctggagatgaaggtacacttaatctagttaaactctctttgtctcattttccacaactagagttccttgttgataataatgagtatgttaatcatcctattcaaaatgtcttctccaagttggttgaactagcactttgtgacatggaaaatttcaaggaactgtgcagtggttcccttcctgtccaacttttgaaaagtttagagacattgctcatatataattgtagacatttacaaggcgtattgtttaaaagcatgttttccctctacaaacttaagtacttgagtttgacttgttgccctatgttgacatctctttgtcaattgtgtacaacacaaagcctagtgttgttggaggatttggatatagctgagtgtgctgagctaaaatacatattttatgttgattctgataatgagaaaaagagtagcagaatagtgtttccaaatttaaaaatgcttcgtatccaaaggtgtccgaagttagattttatacttcctgtggttgctgctcaagacgttccaaagttagaatttatctctataaggaattgcttagagctaagatacatatttagtccacaccaagcatctatgttagagcaagtgttcaaatgtggaattgataaaaaaattgaaattccaaatctaaaagttgtagcatttgtggaacttccaagcctttgcaaggatgttgatgagtttcatactgtaaaggatcgtttggtggtgaattgtccaaaattctcattgacttcaacattaacacatgagaggatcgacgaaattgttgaaaaatatggcatagaagggactgatcaaacaaatcgctttttcaagcaagcattagactggtttgattatatttgtgaacaatataaagcccaaaagaccaacaatcagtattcagatacaaagttggaagggagtgacttgacctcgttgcaggaaagtaagaaaacttttgaagaaggagctacatcggattcggctcagatcatcgcatcgccaacaacttgttcagaaacggatattgacaatgaaataattctggagacaactgtggcaaaagaaccaacaccacaagctaaagaaaaagaatcaacatttaattcagtagatggacaatcatcttcaagttcatctgaagataaacaagaagtccaaggtagcttaaaaaataattcacaagtactttgttttgactttaatcaaggaaataaaggattgaactcctcaacccctgcgctcagtgaacatcttaacaaatatcatatccaagttgatagcaacaaactcaacaacatggggattctgaaatacactcctattgacattgatgattgtcacaaacatcttgatgatgatccatttgtgctgttggattttttttcacacgagatttcattgtcatccaagcaatccaaaaccaaggtggaggaatcttcaatgtctgaaacattagcctctgcactggatgaacttcgacaactcacattctccctaccaatgctggagaatattggtaaggttgagtacagagaaaaagttgaagctgttattaggaaacttgaaatgtttcctaatgatattgaccaagaccttgatgagagaatcagatctttcatcaagttttttgaaaaagctgtcgaagtttgtcaaaagaaatcttcgactattgaactgattaagcaagttcatggtgagaagaaagaagcactggaaaaattacaaagaaccaaagataaagtgtgtgagcttgttgaggttattgagaaatataagccagaactcgaaaacattgagaagcgccaaagagagcttaaggatacaatgaagaaagcccaggaagaattgaatgagttggggaaagacaaagaaaaaattgagtctgcgagcaccaaatattcttcaaagaaagcagaacttcttgaatcagccaagtatgtttcggatgccataataagaaatttcaaacatttgactgaccttgaggagaacaaggccaaacatgatgcagattttgaagccttaaaagagccttacaacaagatgaaggtcaatcctcctttttaa 4272 0.0 MLGIAIDLAKSILEKLIDATVRESQYICCFTCIAEDFEKEKETLKGKSSAVGQYVQVAKNNGESIRSDVIQWHKQVEDLINEDTKTKVTCFFGWCPNCKWRYSRGKDLKTKSEEMKRHIIESSNYISNVVGIQRGVAGVEYYSSQDYISFESRKSSYKELWDALTNYNNYMTGLQGMGGTGKTILAKEVGKELKKSKKFDHVIDTTVSSTPDIKKIQDDIAKPLGLSFNDCTESERPKILWSRLIDGEKILIILDDVWRDIKFEQIGIPLKDNHNGCKILVTTRDLKICNKMKCDRKIQLNLLPDEDAWTLFKMHAGISQSSSESILEVGRKIVKECKGLPVAIAVIARSLNGEEGLEEWKLALEALQNFIPQHGDDKNLDEIHKCLKYSYDNMRNETAKRLFLLCSMFPEDEELCAEILLRCSIGAVLVEEIDNNYDGCRNQVVVANNILIDSCLLLKTEEGSAKMHDLVREVALIIASNEIQAMNISNKNKKSLDGRYNPKYLVCEGNGMYQISSMFDRSKLQILIIYVDGDITDSVEGASSFFENMTGLRVLYLSRKTLTNRSLSLPQSIKSLTNIQSLILEGFDLGDISIVGNLQSLESLDLVRCSMNELPSEIEQLKKLKLLLLKKCYIRQNNPFIIIGNCSSLEELHFVDNHMSTIHHKNINLPKFHRFHIEYFGMRDNSPMNSMYFERADEIFSKTTIKHLVGQVELLNLQTGGWRNIIPEIIQPGDEGTLNLVKLSLSHFPQLEFLVDNNEYVNHPIQNVFSKLVELALCDMENFKELCSGSLPVQLLKSLETLLIYNCRHLQGVLFKSMFSLYKLKYLSLTCCPMLTSLCQLCTTQSLVLLEDLDIAECAELKYIFYVDSDNEKKSSRIVFPNLKMLRIQRCPKLDFILPVVAAQDVPKLEFISIRNCLELRYIFSPHQASMLEQVFKCGIDKKIEIPNLKVVAFVELPSLCKDVDEFHTVKDRLVVNCPKFSLTSTLTHERIDEIVEKYGIEGTDQTNRFFKQALDWFDYICEQYKAQKTNNQYSDTKLEGSDLTSLQESKKTFEEGATSDSAQIIASPTTCSETDIDNEIILETTVAKEPTPQAKEKESTFNSVDGQSSSSSSEDKQEVQGSLKNNSQVLCFDFNQGNKGLNSSTPALSEHLNKYHIQVDSNKLNNMGILKYTPIDIDDCHKHLDDDPFVLLDFFSHEISLSSKQSKTKVEESSMSETLASALDELRQLTFSLPMLENIGKVEYREKVEAVIRKLEMFPNDIDQDLDERIRSFIKFFEKAVEVCQKKSSTIELIKQVHGEKKEALEKLQRTKDKVCELVEVIEKYKPELENIEKRQRELKDTMKKAQEELNELGKDKEKIESASTKYSSKKAELLESAKYVSDAIIRNFKHLTDLEENKAKHDADFEALKEPYNKMKVNPPF 1423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00210 1423 Gene3D Ribonuclease Inhibitor 464 687 IPR032675 -
Pste6g00210 1423 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 963 - -
Pste6g00210 1423 FunFam Probable disease resistance protein At1g61300 136 297 - -
Pste6g00210 1423 Coils Coil 1323 1364 - -
Pste6g00210 1423 MobiDBLite consensus disorder prediction 1086 1121 - -
Pste6g00210 1423 SUPERFAMILY L domain-like 466 924 - -
Pste6g00210 1423 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 406 IPR027417 -
Pste6g00210 1423 Gene3D - 138 299 IPR027417 -
Pste6g00210 1423 MobiDBLite consensus disorder prediction 1097 1121 - -
Pste6g00210 1423 Gene3D Ribonuclease Inhibitor 711 935 IPR032675 -
Pste6g00210 1423 PRINTS Disease resistance protein signature 596 612 - -
Pste6g00210 1423 PRINTS Disease resistance protein signature 244 258 - -
Pste6g00210 1423 PRINTS Disease resistance protein signature 171 186 - -
Pste6g00210 1423 PRINTS Disease resistance protein signature 337 351 - -
Pste6g00210 1423 Pfam NB-ARC domain 156 393 IPR002182 GO:0043531
Pste6g00210 1423 Gene3D - 303 395 IPR042197 -
Pste6g00210 1423 Coils Coil 1295 1315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00210 Pste-Chr6 693831 704018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00210 172 838 WRKY Transcription Factor Family AT5G45050 22.576 1.77e-11 67.4