Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00209 ATACCAATGAGAATTCCATCATGGTTTTCTGTCATTCTCTGATACCTGGTGATCAACAGTCATTGCTGCTACAATTGAAGAACAACCTTTTGTTTAAGCCTAAGAGTTCCACCAAACTGAAGTCATGGAATCAAAGCACTGCTTGTTGTCAGTGGAGGGGTGTAACTTGTGATGAGGAGAGCCATGTTATTGGTCTTGACCTCAGTCACGAGTCAATCTCTGGTGGACTTAACAATTCAAGTAGCCTTTTTGGCCTTCAACATCTCCAAAATTTGAATTTGTCTTACAATAACTTCAACTCATTAACTTATCTAAATTTGGCATATGCTGGCTTTGGGGGGCAGATTCCAATGGAAATTTCTCAACTGTCAAGGTTGGTTACCCTTAATCTGTCAAATTTGTTTATGCTAACGGAACTGAAAATCCAAAATCTAGGGAAGTTTGTCCGAAACTTCACCTCAATAAGACCACTTTATCTAGATAGCGTGACTATATCAGCTGCTGGACTAGAATGGCATGCTGCTTTGTTGCAAATTCCAACTTTGCAAGAACTGAGCATGGCTGAATATAACCTCTCTGGTCCTCTTCTCTCTTCGCTTACAAGACTTGAGAATCTCTCAGTCATTCGTCTTGATCGTAACAACTTTTCATCTGCAGTGCCAGAAACTTTTGCCAATTTCAGAAACCTGACAAGCTTGAGTCTTGTTTTTTCTGAATTGATTGGAATGTTTCCACCAAAGATCTTCCAGATAACATCATTATCCGTCATCGATATATCACATAACTATAATCTTCATGGTTTCTTTCCTGAGTTTCCACTAAATGGATCTCTCCAGAAATTGCTCCAATTTAAGGCACTTGTCATTTCTGGATCTTTTTTATCTCAATTCAACGGATCATTACCCAACTCAATATCAAATCTTACTCAACTTGTTCATGTAGATTTGTCTTCCAATAACTCCACCGGATCAATTCAGACTTTAGGCATGTGCAAGAAACTCCAAAGTATGATCCTCTTTGATAACTCTTTCTCCGGTGCAATACCGTCTGACATCTTTGAAGATCTTGTAAATTTATCTGACATCAGCCTACACAATAATTTCTTCACTGGAATGATTCCCTCCTCTATATTCACACTCCCATCAGTCCACCAGGTATATCTTTCCAACAATGAATTTGAAGGTCAACTCCATAATTTCTCAAATGCCTTTTCTCCTATCCAATGGCTTGATCTGAGTGGAAATCATTTAGAAGGGTCCATTCCCATATCTTTGTTTCAACTCACAAATCTTCATGAACTCAAACTCTCTTTCAATAAGTTCAGCGGCACCATAGAGCTCAATATGCTTAGCAAGCTGGGAAACCTCACCACACTTGACATTTCGTACAACAACTTGACATTAATTGATGCATCCACTCTAATGACTCCATTTCCATTACTTCCAATGTTGTCATCGGTAAGGTTGGCTTCTTGCAAGTTGACATCATTTCCACAATTCTTGAAAAACCATTCACTGATGGATATTGACCTATCAAATAACCATATTGTTGGCACTATACCACAGTGGATTTGGAAAAGCAAATTCCTTAATTATATAAATCTTTCCTGTAACTACCTGACTGACTGGGAGGAACCTATATTCAATAATCTGTCTTCGTTGACCACCCTTGATTTTCATTCAAATATTCTCCACGGACCTCTTCCAACGCTACCTGAGTCAATTATATATTTAGATTTTTCAAGTAACAATTTAACCTCTGTTATCTCCTCAAAGATTGGCAAATACCTTGAATGGACTCTGTTTCTCTCTTTTGCGAGCAATAATTTGAACGGGAATATCCCCGAATCAATATGCAGTGCTCCAAATCTTGAAGTTCTCGACCTCTCTAACAATTCTTTGACAGGCACAATCCCGAAATGCTTGATTGCAATGAATGGAACCCTTAGCGTATTAGATTTAGGGAGGAACAAACTGAATGGCACTATTGATTTTCTTCCTGGCTCGTGTTCCTTACGAACACTACATCTAAATGGCAATGCTCTACAAGGAAAGCTTCCAAAATATCTAGCTAGTTGTACCATGTTGGAGATTTTAGATGTTGGTGAAAACCAGTTACATGGTCATTTCCCCTGTTGGTTGAAGAATATATCCACGGTACGTATTCTTATTCTGCGATCCAACGAATTACATGGCTCCCTCATATGTGGAGGAACCAAGGTATTATGGCCACACCTTCAGATTTTTTACCTTGCATCCAACAATTTTGGTGGCAGAATTCCATTGTCATTCTTCGAACATTGGAAAGCAATCATAGCTGATGAATATAATGGGAGCTTGTCCGAGCCAGATCATCTTCAATTTGAAATCTTCAAATACAATCCTGTTTATTACCAGGACAAAGTTGCAGTCACATACAAACAGCTACAAATGGAGTTAGTAAAGATCCTAACTATCTTCACTGCCATTGACTTGTCATGCAACAAATTTGAGGGACTAATACCAGAAGGGCTTGGACAACTAAATGCTCTCTACATACTTAATCTTTCAAACAATTGGGGAGAATCCCAACAGGTACACAAGTTCAGTCATTTCCAGCAGACTCATTCAAAGGCAATGATGGGCTGTGTGGACCTCCATTGTCCCAGAATTGTAGTGCCCTGGAGGACAAGGTACTGGAAACTTGTTGATGACATACTTTATCACACACTCCCTCAGCTGGATTTTGTGTATGAACGACATAAAGAACAAAGTTACAGAACTCTA 2765 0.3895 MVFCHSLIPGDQQSLLLQLKNNLLFKPKSSTKLKSWNQSTACCQWRGVTCDEESHVIGLDLSHESISGGLNNSSSLFGLQHLQNLNLSYNNFNSLTYLNLAYAGFGGQIPMEISQLSRLVTLNLSNLFMLTELKIQNLGKFVRNFTSIRPLYLDSVTISAAGLEWHAALLQIPTLQELSMAEYNLSGPLLSSLTRLENLSVIRLDRNNFSSAVPETFANFRNLTSLSLVFSELIGMFPPKIFQITSLSVIDISHNYNLHGFFPEFPLNGSLQKLLQFKALVISGSFLSQFNGSLPNSISNLTQLVHVDLSSNNSTGSIQTLGMCKKLQSMILFDNSFSGAIPSDIFEDLVNLSDISLHNNFFTGMIPSSIFTLPSVHQVYLSNNEFEGQLHNFSNAFSPIQWLDLSGNHLEGSIPISLFQLTNLHELKLSFNKFSGTIELNMLSKLGNLTTLDISYNNLTLIDASTLMTPFPLLPMLSSVRLASCKLTSFPQFLKNHSLMDIDLSNNHIVGTIPQWIWKSKFLNYINLSCNYLTDWEEPIFNNLSSLTTLDFHSNILHGPLPTLPESIIYLDFSSNNLTSVISSKIGKYLEWTLFLSFASNNLNGNIPESICSAPNLEVLDLSNNSLTGTIPKCLIAMNGTLSVLDLGRNKLNGTIDFLPGSCSLRTLHLNGNALQGKLPKYLASCTMLEILDVGENQLHGHFPCWLKNISTVRILILRSNELHGSLICGGTKVLWPHLQIFYLASNNFGGRIPLSFFEHWKAIIADEYNGSLSEPDHLQFEIFKYNPVYYQDKVAVTYKQLQMELVKILTIFTAIDLSCNKFEGLIPEGLGQLNALYILNLSNNWGESQQVHKFSHFQQTHSKAMMGCVDLHCPRIVVPWRTRYWKLVDDILYHTLPQLDFVYERHKEQSYRTL 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00209 915 Pfam Leucine rich repeat N-terminal domain 10 51 IPR013210 -
Pste6g00209 915 ProSiteProfiles Leucine-rich repeat profile. 81 102 IPR001611 GO:0005515
Pste6g00209 915 PANTHER UNNAMED PRODUCT 11 534 - -
Pste6g00209 915 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 342 438 - -
Pste6g00209 915 Gene3D Ribonuclease Inhibitor 463 866 IPR032675 -
Pste6g00209 915 Gene3D Ribonuclease Inhibitor 8 93 IPR032675 -
Pste6g00209 915 Gene3D Ribonuclease Inhibitor 94 462 IPR032675 -
Pste6g00209 915 SUPERFAMILY L domain-like 31 274 - -
Pste6g00209 915 SMART LRR_typ_2 79 104 IPR003591 -
Pste6g00209 915 SMART LRR_typ_2 196 219 IPR003591 -
Pste6g00209 915 SMART LRR_typ_2 446 469 IPR003591 -
Pste6g00209 915 SMART LRR_typ_2 421 445 IPR003591 -
Pste6g00209 915 SMART LRR_typ_2 474 497 IPR003591 -
Pste6g00209 915 SMART LRR_typ_2 544 571 IPR003591 -
Pste6g00209 915 SMART LRR_typ_2 349 373 IPR003591 -
Pste6g00209 915 SMART LRR_typ_2 615 638 IPR003591 -
Pste6g00209 915 SUPERFAMILY L domain-like 469 876 - -
Pste6g00209 915 ProSiteProfiles Leucine-rich repeat profile. 448 469 IPR001611 GO:0005515
Pste6g00209 915 SUPERFAMILY RNI-like 270 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00209 Pste-Chr6 685125 694795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00209 4 845 Receptor kinase-like Gene Family AT1G47890 31.561 1.21e-105 349