Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00200 TGGAGTTAAAAATTGAGGAAATGAGAAGGGGGCGAAACGGAGAAGGCCCAATGTGGTTTGTAGTGAGATCTGAATTGGGAGAGAGGGGAAGATCAGAGAAATCAGATCTGATGGAGAAGTCGTGCAGTCTAGTGGTTCACTTCGACAAGGGCACGCCGGCGCTGGCGAACGAGATCAAGGAGGCGCTGGAAGGAAACGAAGTGGAAGCAAAGATCGAGGCTCTGAAGAAGGCAATAATGCTTCTCCTGAACGGAGAGACCATCCCGCAGCTCTTCATAACAATAATCAGGTACGTTCTCCCCTCGGAGGACCACACTATTCAGAAGCTTCTCCTCCTTTACCTGGAGATCATCGACAAGACCGATTCCCGCGGCAAGGTTCTCCCTGAGATGATCCTCATCTGCCAGAACCTCCGCAACAACCTCCAGCACCCTAACGAGTACATCCGCGGCGTCACTCTCCGTTTCCTCTGCCGCCTCAACGAGTCCGAGATCATCGAGCCTCTCATTCCCTCCATTCTCTCCAATCTCGAGCACCGCCACCCCTTCGTTCGCCGCAACGCCGTCCTCGCCGTCATGTCCGTCTACAAGCTCCCCCAGGGTGAGCAGCTCCTCGACAGCGCCCCTGAGATCGTCGACAAGTTCTTGTCCTCCGAGCAGGATCCTTCCAGTAAGCGCAATGCCTTTCTCATGCTTTTTTCCTGCGCTCAGGATCGCGCTATCAATTATCTCTTTTCCAATATCGATCGTATTATTGACTGGGGCGAACAGCTTCAGATGGTTGTTCTTGAGCTTATTAGAAAGGTTTGTAGGAGTAATAAGGGTGAGAAGGGTAAGTACATTAAGATTATTATTTCCCTTCTCAATGCTCCTTCCACTGCTGTTATTTATGAATGCGCCAGCACTCTTGTCTCCCTCTCTTCTGCCCCCACTGCCATTAGGGCTGCTGCTAGTACTTACTGTCAGCTTTTGCTCTCTCAGAGTGATAACAATGTTAAGCTCATTGTCCTCGATCGTTTGAATGAGCTCAAGACTTCCAATCGGGACATCATGGTCGAAATGGTCATGGATGTCCTTCGTGCTCTTTCCACCCCCAATCTTGATATTCGCAGGAAGACTCTTGATATTGCTCTCGACCTCATTACCCCCCGTAACATTGATGAGGTTGTTATGATGCTCAAGAAGGAGGTTGTTAAAACCCAGAGTGGGGAGCATGAGAAGAATGGTGAGTACAGGCAGATGCTGGTCCAGGCTATTCATACTTGTGCCATTAAGTTCCCTGACGTCGCCAGCACTGTTGTGCATCTGTTGATGGACTTCTTGGGCGATACCAATGTGGCTTCTGCCATGGATGTTGTTGTTTTTGTTCGCGAGATCATCGAGACCAACCCCAAGTTGCGGATTTCTATAATCACCAGGCTTTTGGACACTTTCTACCAAATCCGTGCTGCAAGGGTGTGTTCATGTGCACTCTGGATAATTGGCGAATATTGCCTGTCACTTTCAGAGGTTGAGAGTGGAATTGCTACCATTAAACAGTGTCTTGGTGACCTTCCATTTTATACTGTTACTGAGGAAGGAGAAGGTCAAGAGGCATCAAAACCCATACAGCAGGTGAACTCAACCACTGTGTCTTCTAGGAGGCCTGCAATTCTTGCAGATGGGACCTATGCTACCCAGAGTGCTGCCCTGGAAACTGCCATGTCACCTCCTACTCTTGTACAGGGGTCGCTATCTTCTATTGGGAACTTGAGATCACTCATTCTCTCGGGTGATTTCTTTCTTGGGGCAGTAGTGGCATGTACACTGGCAAAACTTGTCTTGAGGTTGGAAGAGGTCCAGACTTCAAAAGTTGAAGTTAACAAAGCAACTACTCAGGCCTTGTTGATCACTGTGTCAATGCTACAGCTGGGTCAGTCTTCAATTCTTCCACATCCAATTGACAATGATTCTTATGACAGGATTGTCCTCTGCATTAGATTGCTGTGCAATACTGGTGATGAAATAAGGAAGATATGGTTGCAATCTTGCAGACAGAGCTTTGTGAAAATGCTTGCAGATAAGCAGCGCCGTGAGATTGAGGAGATTAAAGCTATGGCTCAAATATCTAATGCACAGCCTGATGATCTTATTGATTTTTACCATTTGAAGAGCAGGAAGGGTATGAGCCAACTTGAGCTGGAAGATGAAGTTCAAGATGATCTCAAACGTGCTACTGGAGAGTTTACAAAGGATGCAGATGATGCAAATAAGCTCAACCGCATTCTTCAGCTCACTGGATTCAGTGATCCTGTTTATGCTGAAGCATATGTAACAGTGCATCACTATGACATTGTACTTGATGTTACTGTCATCAACCGAACAAAGGAAACTCTTCAGAATCTGTGTTTGGAGTTAGCAACCATGGGTGACCTCAAACTAGTTGAGCGCCCACAAAACTATACACTTGCTCCAGAATCAAGTAAACAGATTAAGGCTAACATTAAGGTTTCATCAACTGAAACTGGAGTTATTTTTGGTAACATTGTCTATGAAACATCTTCTAATGTTCTTGAAAGAACAGTTATTGTTTTAAATGATATCCATATTGATATCATGGACTACATTTCTCCTGCATCTTGTGCTGATGTGGCATTCAGAACTATGTGGGCTGAGTTTGAGTGGGAAAACAAGGTTGCTGTAAATACAGTATTACAAGATGAGAGGGAGTTCCTGAACCACATTATCAAGTCTACAAATATGAAGTGCCTGACACCACCATCGGCATTGGAAGGGGATTGTGGTTTCCTTGCTGCGAACCTTTATGCTAAGAGTGTTTTTGGAGAAGATGCTTTGGTGAATGTGAGCATTGAAAAGCAAGCAGATGGTAAGTTGAGTGGATACATCAGAATAAGAAAAGGGAACCGCTTGATAGGAGAATCCCCCGTTTTCTCTGATGTTCCTAAGCGTGAATTAGAAGACAAACTAAAGGCGCGTAAAATCAACGATAGGAATTGCGTGCAGCGAAAACGAGAATATCGTTGGGTGACTGTTGAGACAATTGAAACAGGATCTAAAAGCAAAACTAATTATCATTTCGAAATAGCACTTGATTTGCCACTGATGGGCAATCTTGAAGTAGCCAGAAAGTGCTTGACAACTAGTTTGGAAACATCAAGCGCCATTGCCTCTGCATTAGATGAATCTGGATCAAGATTGGAGCTACTTAACCAGAGGTATCTGTCCTTGCAAGCTTCCCTTAAACCCATCTCAATGCACAAGTGCACATTTTTCAACATTGACCACTGTGTAGACAGTGTTCTATGTGTTGCTGCTGCAATCCTCAAGGTTTCTGACTCTGTTCATCAGTTGGAGCATTCTCTCTTAACTGACCCCTCTTTTGATCTGCACACGTATGCCTCAAATACAAAGAAGCTTGAGGAAGCATTGAAGCTTCTCACTGATAATTGCAGGTTAGCAGGTGGCTGGTTAAAGGGCGTTTTTGAGTTCTTACAAGACAAAACAATCACCAATGAGCTTTACCTATTGAATGTTAAGAAATCTTTGACAATATTGCAAGAATTTCAGGTCAAGGAGGAAAGTGCTCGTCTTGATGGAGGCGTTCTTAGTACTGCTTTTGACAAACTAGAGCTCGAGTTCCACAGGCTTCTGATTGCAAATTCGATGCCTTTTCCTTTGATTTCATTGTCATCATATATTGGGCAGCAGGTCAGTATTGCAAAACAAGCTTTGCCATTGACAAGTTCTTTACCAGGGAAGTTGCATGCCATCATTGAGAGGTTAAATGCAAATGGCAGGCTAGATAAGTGTCAATCTATATATGTTGAGGTTCGAGGTATGAATGCTCGTCGAAGCTTAAAGACTTTAGATTTGAGTTACCTTGAGATTCCAACAGCTGAATTTGAGGCTGTACAGTCTATAGAGAGTTACATAGATCAATGGGGCAGCCATTTGGAGTTGGTTGTGACACAACTGCTCGAGATTGAGTGCAGGCTGTGTACTATTGTCTTTGAGAAAATTGGTCCAGAAGTATGGATAGGGTGTTTTGCAAAGATTGCCAATGAATCAGGAATTCTTTCTTTTATTCGATTTGGAAGGATAGTTACTGAGAGGAAAAATGACCCCTTTAAGTTGTTGAGCCTGCTGTCCATATTCAGGGTCTTAAATGGTCTTAGGCTTAAATTCAACCAGCTTTTCAGTGCGAAAGCTTGTAAAGAAATTAGAACTGTGACGGAGGATCTCATAAAAAAAGTTGTGAATGGTGCCAGCGAGATATTCTGCCAACTTCCAGCACAAGTGAAGTTGCAAAGGCCAACTTCTCCTCCTCCTGACGGCAGCGTTCCCAGGCTGGTAAGCTTCGTCACTGATTACTGCAATCAGCTGCTTGGGGATGCCTATAGGCCACATTTGACACAGGTTTTGGGAATACATCTCAGCTGGAGGAAGGAAGCATACGAAGAGGGTATTGTTTCAAGTCAAATATATAACACAGTCAAGGAGGTTGGTGTAAATTTGGACGCTTGGTCGAAGGCCTATGAAGATATCACTTTATCCTATCTTTTTATGATGAATAATCACTGTCATTTTTGCAATTTGAGGGGTACTGTGCTTGGAAATATGATGGGAGATTCTTGGTTAAGGGCACACGAACAATATAAGGACTATTATTCAGCACTTTATTTGAGGAATAGCTGGGGAAAGCTTGTAACAATTCTTGTAGCTCAAAGGGACATACTTTCACCCTTGGGTGCAAGTGTAACAAGCCAAGACTTGGCAAAGAAACTAAATGCTTTCAATTTAGCTTTTGATGAAAGGTACAAGAAGCAATCTAATTGGGTGATATCCGATGAGATGTTGAGAGAAAATGTGTGCAAGCATTTGGCTGAAGGTATTATACCAATCTATAGGGCCTACATCAAGAATTATTATAGTTTGTCAATTGAAAATGATACTAAAGTTGAGAAGCATATGAAATATACCGTACAGACTTTGGAGAACAAAATTAGGTCTCTGTATCAGCCAAAGCAGAGGAAGGATAGTAGCATTAAACAGGCAGTGTTGCTTCGTAAAATAAAAGAAGTCAGCCATCAATTTCGTTTGACTCTAGCTTCTCTT 5114 0.4359 MRRGRNGEGPMWFVVRSELGERGRSEKSDLMEKSCSLVVHFDKGTPALANEIKEALEGNEVEAKIEALKKAIMLLLNGETIPQLFITIIRYVLPSEDHTIQKLLLLYLEIIDKTDSRGKVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNESEIIEPLIPSILSNLEHRHPFVRRNAVLAVMSVYKLPQGEQLLDSAPEIVDKFLSSEQDPSSKRNAFLMLFSCAQDRAINYLFSNIDRIIDWGEQLQMVVLELIRKVCRSNKGEKGKYIKIIISLLNAPSTAVIYECASTLVSLSSAPTAIRAAASTYCQLLLSQSDNNVKLIVLDRLNELKTSNRDIMVEMVMDVLRALSTPNLDIRRKTLDIALDLITPRNIDEVVMMLKKEVVKTQSGEHEKNGEYRQMLVQAIHTCAIKFPDVASTVVHLLMDFLGDTNVASAMDVVVFVREIIETNPKLRISIITRLLDTFYQIRAARVCSCALWIIGEYCLSLSEVESGIATIKQCLGDLPFYTVTEEGEGQEASKPIQQVNSTTVSSRRPAILADGTYATQSAALETAMSPPTLVQGSLSSIGNLRSLILSGDFFLGAVVACTLAKLVLRLEEVQTSKVEVNKATTQALLITVSMLQLGQSSILPHPIDNDSYDRIVLCIRLLCNTGDEIRKIWLQSCRQSFVKMLADKQRREIEEIKAMAQISNAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFTKDADDANKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSSNVLERTVIVLNDIHIDIMDYISPASCADVAFRTMWAEFEWENKVAVNTVLQDEREFLNHIIKSTNMKCLTPPSALEGDCGFLAANLYAKSVFGEDALVNVSIEKQADGKLSGYIRIRKGNRLIGESPVFSDVPKRELEDKLKARKINDRNCVQRKREYRWVTVETIETGSKSKTNYHFEIALDLPLMGNLEVARKCLTTSLETSSAIASALDESGSRLELLNQRYLSLQASLKPISMHKCTFFNIDHCVDSVLCVAAAILKVSDSVHQLEHSLLTDPSFDLHTYASNTKKLEEALKLLTDNCRLAGGWLKGVFEFLQDKTITNELYLLNVKKSLTILQEFQVKEESARLDGGVLSTAFDKLELEFHRLLIANSMPFPLISLSSYIGQQVSIAKQALPLTSSLPGKLHAIIERLNANGRLDKCQSIYVEVRGMNARRSLKTLDLSYLEIPTAEFEAVQSIESYIDQWGSHLELVVTQLLEIECRLCTIVFEKIGPEVWIGCFAKIANESGILSFIRFGRIVTERKNDPFKLLSLLSIFRVLNGLRLKFNQLFSAKACKEIRTVTEDLIKKVVNGASEIFCQLPAQVKLQRPTSPPPDGSVPRLVSFVTDYCNQLLGDAYRPHLTQVLGIHLSWRKEAYEEGIVSSQIYNTVKEVGVNLDAWSKAYEDITLSYLFMMNNHCHFCNLRGTVLGNMMGDSWLRAHEQYKDYYSALYLRNSWGKLVTILVAQRDILSPLGASVTSQDLAKKLNAFNLAFDERYKKQSNWVISDEMLRENVCKHLAEGIIPIYRAYIKNYYSLSIENDTKVEKHMKYTVQTLENKIRSLYQPKQRKDSSIKQAVLLRKIKEVSHQFRLTLASL 1698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00200 1698 Gene3D - 44 561 IPR011989 -
Pste6g00200 1698 Pfam Exo70 exocyst complex subunit 1306 1662 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pste6g00200 1698 SUPERFAMILY Cullin repeat-like 1100 1665 IPR016159 -
Pste6g00200 1698 Gene3D Exocyst complex component Exo70 1155 1674 - -
Pste6g00200 1698 PANTHER COATOMER SUBUNIT BETA 33 960 IPR016460 GO:0005737|GO:0006886
Pste6g00200 1698 SUPERFAMILY ARM repeat 46 669 IPR016024 -
Pste6g00200 1698 Coils Coil 679 699 - -
Pste6g00200 1698 Pfam Coatomer beta C-terminal region 700 838 IPR011710 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Pste6g00200 1698 Pfam Coatomer beta subunit appendage platform 845 962 IPR029446 -
Pste6g00200 1698 FunFam Coatomer subunit beta 41 561 - -
Pste6g00200 1698 Pfam Adaptin N terminal region 50 496 IPR002553 GO:0006886|GO:0016192|GO:0030117
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00200 Pste-Chr6 645747 658139 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00200 1030 1676 EXO70 exocyst subunit family AT4G31540 50.076 0.0 634