Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00183 ATGGAGCGAGGAATAAGCATGATGCAGCTAAGGTGTGTGGGGATGTTGATATTGTGCAGCACATTCTTTGCATGCGGTGTTGAACAGCAAGCGGAAATGGCAGGGGGGAGTTACATGAAGATGGTGAGGAACGCGAGCGAGTTACCGTTGGAAGAGTACTACGACTACATAATAGTGGGTGGGGGAACGGCGGGGTGCCCACTGGGGGCGACACTATCGCAGTGGTATAGAGTGCTGTTGCTGGAAAGAGGAGGGGCAGGGAGGGGGAACCCGAACCTGATGAACCAAGAAGGGTTCTTGAGGAACCTGTTGAACGAGGAAAGCGAGGAGTCTCCGGCGCAAGGTTTCGTGTCGGAAGAGGGGGTGGCGAACGCGAGAGGGAGAGTTCTTGGAGGAAGCAGCGCAATAAACGCGGGGTTCTACAGCAGAGCGGAGGGGGAGTTCTTCGAGAAGTCGGGGTTGGGGTGGGACATGGGGATGGTGAAGGAATCATACGAGTGGGTGGAGAAGGAAATAGTGTTCAGACCGAAGCTGAAGAGGTGGCAGAAGGCGGTTAGGGATGGGTTGGTGGAGGCAGGGGTAACACCGTACAATGGATTCAGTCTGGAGCACGCAAAGGGAACAAAGATAGGGGGTTCGACATTCGACAGCGGGGGCAGAAGACACAGCTCTGCGGATCTTCTGAGACACGCAAGTCCGTGGAAGATGAAGGTGGGGGTTGAGGCGAGCGTGGAGAGGGTGGTTCTCGGGAGTAAGGGGGCTATAGGAGTGGTGTACCGTGATGAGAGAGGGAGGTACCACCAGGCATTTTTGAGGGAACACGGTGAGGTCATTCTCTCCGCTGGTGCCATTGGAAGCCCTCAGCTTCTTCTTCTCAGCGGTATCGGTCCAAGGCCATATCTCTCTTCCTGGGGGATTCCCGTTGCTCACCACCTTCCCTACGTCGGCCACTTCCTCTACGATAATCCCAGAAACGGAATTACCCTTCTGCCCTCCCTTCCACTCGAGCATTCTCTTATCCAAGTTGTTGGCATCACCGACTCCGGCGCCTACATTGAGGCCGCCTCCAACCTCGTTCCTTTCACCTCCCCTCCCCACACCTCCTTCGTCCACTCCCCCCTCTACCTCACCGTCGCCACCCTCATTTCCAAGATCTCCGGCCCTCTCTCCTCTGGTTTTCTTAGACTCTCTTCCACCGATGTTAAGGTCAATCCTGTTGTCCGATTCAATTACTTCAACCACCCCGTTGACCTTGAGCGCTGCGTCAACGGGACCACCAAGATCGCCGACATTCTTCGCACCACCCCTTTCAAAGATTTCATGTTCACCAACTGGTTTGGCCACCGTGACTTCAGTTTTATCGGCCCTGCTCTCCCTCTTCACCCCTCCTCCATGCCCGATTTCTGCCGCCGCACTGTCTCCACCATTTGGCACTACCACGGAGGATGCGTCGTTGGCAGGGTCGTTGATCCTCATCTCCGTGTCATCGGACTTTCTTCCCTTCGTATTGTCGATGGATCCGTCTTTAGCGTATCCCCTGGTACCAATCCTCAGGCCACACTCATGATGCTCGGACGGTATGTTATCTCTTCTCTTCTCTTCTCTTCTCTTCTCATTCTCTTCTCATTCTCTTCTCATTCTTTTCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCAG 1677 0.5498 MERGISMMQLRCVGMLILCSTFFACGVEQQAEMAGGSYMKMVRNASELPLEEYYDYIIVGGGTAGCPLGATLSQWYRVLLLERGGAGRGNPNLMNQEGFLRNLLNEESEESPAQGFVSEEGVANARGRVLGGSSAINAGFYSRAEGEFFEKSGLGWDMGMVKESYEWVEKEIVFRPKLKRWQKAVRDGLVEAGVTPYNGFSLEHAKGTKIGGSTFDSGGRRHSSADLLRHASPWKMKVGVEASVERVVLGSKGAIGVVYRDERGRYHQAFLREHGEVILSAGAIGSPQLLLLSGIGPRPYLSSWGIPVAHHLPYVGHFLYDNPRNGITLLPSLPLEHSLIQVVGITDSGAYIEAASNLVPFTSPPHTSFVHSPLYLTVATLISKISGPLSSGFLRLSSTDVKVNPVVRFNYFNHPVDLERCVNGTTKIADILRTTPFKDFMFTNWFGHRDFSFIGPALPLHPSSMPDFCRRTVSTIWHYHGGCVVGRVVDPHLRVIGLSSLRIVDGSVFSVSPGTNPQATLMMLGRYVISSLLFSSLLILFSFSSHSFLSLSLSLSLSQ 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00183 559 Gene3D - 54 525 IPR036188 -
Pste6g00183 559 PANTHER OSJNBA0019K04.7 PROTEIN 23 530 - -
Pste6g00183 559 Gene3D - 174 475 - -
Pste6g00183 559 SUPERFAMILY FAD-linked reductases, C-terminal domain 319 482 - -
Pste6g00183 559 ProSitePatterns GMC oxidoreductases signature 1. 127 150 IPR000172 GO:0016614|GO:0050660
Pste6g00183 559 Pfam GMC oxidoreductase 54 322 IPR000172 GO:0016614|GO:0050660
Pste6g00183 559 SUPERFAMILY FAD/NAD(P)-binding domain 39 339 IPR036188 -
Pste6g00183 559 ProSitePatterns GMC oxidoreductases signature 2. 282 296 IPR000172 GO:0016614|GO:0050660
Pste6g00183 559 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Pste6g00183 559 Pfam GMC oxidoreductase 388 526 IPR007867 GO:0016614
Pste6g00183 559 PIRSF Alcohol_oxidase 347 530 IPR012132 GO:0050660
Pste6g00183 559 PIRSF Alcohol_oxidase 37 357 IPR012132 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00183 Pste-Chr6 595155 596925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00183 38 533 Miscellaneous Gene Families AT5G51950 44.954 6.07e-142 421