Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00176 ATGATAATTGCAGGGGCAACCGATACTACAAGAGTTACTATGATATGGGCACTTTCATTGTTGTTGAATAATAGGCATGCTTTGAAGAAAGTGCAAGATGAATTGCATGAGCAAGTGGGCAAGGAAAGACTAGTGAATGAATTGGACATTAATAAATTAGTTTACCTTCAAGCTGTGGTTAAAGAGACACTACGATTATATCCAGCTGGGCCATTATCAGGTTCGCGTGAATTTACAGAGAATTGTAATTTAGGTGGTTACAAAATCAAAGCTGGTACTCGATTTATGCTGAATATTTGGAAAATGCATAGAGATCCACGTGTATGGTTAGACCCATTAGAGTTTCAACCAGAGAGATTCTTAAGCACCCATAAAAGTGTGGATGTGAAAGGTCAACATTTTGAATTCCTTCCCTTTGGTGGTGGAAGAAGGTCCTGTCCTGGCATACCATTTGGCATTCAAATGACACACTTGGCATTGACAACTTTTTTGCATGCATTTGAAATCACAGCCCCATCCAATGCTCAGGTTAATATGACTGCCACATTTGGACTCACAAACATGAAAACCACTCCTCTTGAGCTTTTAATCAAACCTATTTTACCACATCAACTATTCTTCCAAGATGAAGCTTAG 636 0.3884 MIIAGATDTTRVTMIWALSLLLNNRHALKKVQDELHEQVGKERLVNELDINKLVYLQAVVKETLRLYPAGPLSGSREFTENCNLGGYKIKAGTRFMLNIWKMHRDPRVWLDPLEFQPERFLSTHKSVDVKGQHFEFLPFGGGRRSCPGIPFGIQMTHLALTTFLHAFEITAPSNAQVNMTATFGLTNMKTTPLELLIKPILPHQLFFQDEA 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00176 211 Gene3D Cytochrome P450 1 199 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00176 211 PRINTS P450 superfamily signature 5 22 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00176 211 PRINTS P450 superfamily signature 137 146 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00176 211 PRINTS P450 superfamily signature 58 69 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00176 211 PRINTS E-class P450 group I signature 14 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00176 211 PRINTS E-class P450 group I signature 98 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00176 211 PRINTS E-class P450 group I signature 146 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00176 211 PRINTS E-class P450 group I signature 57 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00176 211 PRINTS E-class P450 group I signature 136 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00176 211 Pfam Cytochrome P450 3 183 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00176 211 SUPERFAMILY Cytochrome P450 2 199 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00176 211 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 139 148 IPR017972 GO:0005506|GO:0016705
Pste6g00176 211 PANTHER CYTOCHROME P450 82C3-RELATED 2 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00176 Pste-Chr6 572997 573632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00176 2 206 Cytochrome P450 AT4G31950 52.913 1.18e-76 237