Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00174 CTTCGTCGTAGCACTGTATAGTAAAATCCGCCGTTTCTTCACAGAGCGAAGATTGAAGAATAGTCAACGACTGCGCTTGATCCTCTTCAAATCAGGTTCTGGTGGCTGAAACCCTGTTCTGGAAATTGGGTGATTTGGCTTAGTGTCAGGGGGTATGGCTGAAAATGAAGATGCTGCTGCACAGGAATTTGCACCAAAGAAGAAACCACCTTCAGAGGATGAGAAAAGGAAGAAGAAAATTGTGCCTGGGAGTTTGATGAAAGCTTTGGTAAGGCCTGGTGGGGGTGATGCTGGACCTTCAGATGGGGATCAGATTATCTATCACTGCACGATTCGAACTTTGGATGGTGTACTCGTGGAATCTACGAGATCTGATTACGGAGGCAAGGGAATCCCAATACGACATGTTTTGGGCAAAAGCAAGATGTTATTGGGTTTGTTAGAGGGAATTCCTACAATGTTGAAGGGTGAAGTGGCAATGTTCAAGATGAAGCCACAGTTGCATTATAATGAGGATGATTGTCCTGTTTCTGCTCCTGATGGTTTTCCTAAAGATGATGAACTCCATTTTGAAATTGAGCTGATAGAATTTTTCAAAGCCAAGGCAAGGATGTCAACTTTTGTTGTTACTGATGATTTGGGAGTTGTGAAAAAGGTAGTACGTGAAGGCCATGGTTGGGAATCTCCAAGAGAACCTTATGAAGTGAAGGCTTGGATTTCTGCAAAGACTGTTACTGGGAAATATATCATGTCACATACTGACGGAGAACCATACTTCTTTACATTTGGAAAATCAGAGGTACCTAAGGGCCTTGAAATGGCAATAGGAACAATGGTTCGGGAAGAGAAGGCTGTTATATATGTTACCAGTCAGTATTTATCGGAGTCTCCTCTGATGCCTGTAATTGAAGGTTATGATGAAGTCCATTTTGAAGTAGAGCTGGTTCACTTTATTCAGGTGAGGGACATGCTTGGAGATGGACGCCTAATAAAACGCCGAATTCGTGATGGGAAAGGTGATTTTCCAATGGATTGTCCCCTTCATGACAGTCTACTTCGTGTACACTACAAGGGTACTGTTCTCAATGAAAAAAAGAAGGTATTCTATGATACAAGGGTAGACAATGATGGTCAGCCGTTGGAGTTCTGTTCCGGAGAAGGACTTGTGCCTGAGGGATTTGAAATGAGTGTTCGTCTGATGCTTCCTGGAGAGATAGCCCTTGTCACATGCCCTCCTGACTATGCTTATGATAAGTTTCCAAGGTTGCTGAAGAAAGTACATACCTTTTACTGTGTGTTTAACCAATAA 1309 0.4278 MAENEDAAAQEFAPKKKPPSEDEKRKKKIVPGSLMKALVRPGGGDAGPSDGDQIIYHCTIRTLDGVLVESTRSDYGGKGIPIRHVLGKSKMLLGLLEGIPTMLKGEVAMFKMKPQLHYNEDDCPVSAPDGFPKDDELHFEIELIEFFKAKARMSTFVVTDDLGVVKKVVREGHGWESPREPYEVKAWISAKTVTGKYIMSHTDGEPYFFTFGKSEVPKGLEMAIGTMVREEKAVIYVTSQYLSESPLMPVIEGYDEVHFEVELVHFIQVRDMLGDGRLIKRRIRDGKGDFPMDCPLHDSLLRVHYKGTVLNEKKKVFYDTRVDNDGQPLEFCSGEGLVPEGFEMSVRLMLPGEIALVTCPPDYAYDKFPRLLKKVHTFYCVFNQ 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00174 384 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 21 150 - -
Pste6g00174 384 SUPERFAMILY FKBP-like 157 266 - -
Pste6g00174 384 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 51 147 IPR001179 GO:0003755
Pste6g00174 384 FunFam Peptidylprolyl isomerase 157 267 - -
Pste6g00174 384 Gene3D - 156 267 IPR046357 GO:0003755
Pste6g00174 384 MobiDBLite consensus disorder prediction 9 30 - -
Pste6g00174 384 SUPERFAMILY FKBP-like 24 150 - -
Pste6g00174 384 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 298 365 IPR001179 GO:0003755
Pste6g00174 384 Gene3D - 268 370 IPR046357 GO:0003755
Pste6g00174 384 Gene3D - 1 152 IPR046357 GO:0003755
Pste6g00174 384 SUPERFAMILY FKBP-like 273 368 - -
Pste6g00174 384 MobiDBLite consensus disorder prediction 1 31 - -
Pste6g00174 384 FunFam Peptidylprolyl isomerase 8 150 - -
Pste6g00174 384 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 181 264 IPR001179 GO:0003755
Pste6g00174 384 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 48 144 IPR001179 GO:0003755
Pste6g00174 384 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 299 367 IPR001179 GO:0003755
Pste6g00174 384 FunFam Peptidylprolyl isomerase 268 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00174 Pste-Chr6 568273 580007 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00174 163 370 Calmodulin-binding Proteins AT5G48570 28.972 3.05e-15 75.5