Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00173 ATGCCTTATGATATCATTGGCATACTTCCTCCTTTTATGACCAGGCCTGTAAATGTCCCTGAGGGTGCTTGTATTGAATGGGAAATTGAGCTTCTAGGTTTTGAATCGCCAAAGGACTGGACTGGATTGGACTTTAAAAGTATAATGAATGAAGCTGAAAACATCAGAAACACGGGTAACAGGCTGTTCAAAGAAGGAAAATATGAACTTGCTAAGGCAAAGTATGAAAAGGTGCTACGAGAATTTAATCATGTGAATCCACAAGATGATGAAGAAGGAAAAATTTTTGCTGACACACGTAATTTGCTACACCTGAATGTTGCTGCATGCCTTCTAAAACTGGGAGAATGCAGAAAGTCCATAGAGACTTGCAATAAGGTTTTAGAAGCAAATCCTGCACATGTCAAGGGTCTTTATCGTCGTGGAATGGCTTACATGACTGTTGGAGATTTCGAAGAAGCAAGGGCTGATTTCAAAATGATGATGAAAGTTGACAAGTCAACTGAATCAGATGCAACTGCAGCTCTTCAAAAACTGAAGCAGAAGGAGCAGGAAGTTGAGAAGAAAGCTAGGAAACAATTTAAAGGGCTATTTGACAAGAAGCCTGGAGAAATTTCAGAAGCTAAAGCTGATGTAGATGGAGATCAGATCACAAGTGAAAGCCAGAAGGATGATGAAGTACACGGGGACTCTGATGGAGCAAATTCTGAGGATTCACGTGAAGTGCCGCCCGAAGCACGTCGACAGGGTTGGTTCTCTCTCTTTTGGCCTTCTGGCAGAAGATTTTTTGAATCTCTTGGGCTTAATAGATGTACCATACTGTAACTGCAAGCTTGTAGTAGTTGGTCATAATACAATCTCCAAAAAAAAGAAGGCATTTCAGGTCACTTGATACACTGGTATTTGAAGAATGAGTTCAGGTATTTGTAACTTATGTTACCGGGAAATTTTATGATGTCTGAAAGTGTTTTTTCGTTTGAGTTTAATTGGTATACATTGTCTGTATAAAAGATTTATATATTGATATTCAATCATGCCTTTTCATTTATGTGACTTTTAAAGTAGTAATGAGTAAAGTCAACAAATTTACCATGAATGAATAGCTGTGATTGAATGTCAGTGTAAAAATCTTTACACTGACAATGTATACTAATTAAACTCTTTTAGTTTTCAACTTTTGTATTATCACATGGAAAATTGTTTTTCTTTTATATCAAATAAAAGACAGTTGTAAGCATAATAGGAAATAACAAAAAAC 1258 0.3665 MPYDIIGILPPFMTRPVNVPEGACIEWEIELLGFESPKDWTGLDFKSIMNEAENIRNTGNRLFKEGKYELAKAKYEKVLREFNHVNPQDDEEGKIFADTRNLLHLNVAACLLKLGECRKSIETCNKVLEANPAHVKGLYRRGMAYMTVGDFEEARADFKMMMKVDKSTESDATAALQKLKQKEQEVEKKARKQFKGLFDKKPGEISEAKADVDGDQITSESQKDDEVHGDSDGANSEDSREVPPEARRQGWFSLFWPSGRRFFESLGLNRCTIL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00173 274 ProSiteProfiles TPR repeat profile. 135 168 IPR019734 GO:0005515
Pste6g00173 274 FunFam Peptidylprolyl isomerase 40 196 - -
Pste6g00173 274 MobiDBLite consensus disorder prediction 205 245 - -
Pste6g00173 274 Pfam Tetratricopeptide repeat 136 159 IPR019734 GO:0005515
Pste6g00173 274 SMART tpr_5 101 134 IPR019734 GO:0005515
Pste6g00173 274 SMART tpr_5 135 168 IPR019734 GO:0005515
Pste6g00173 274 SMART tpr_5 52 85 IPR019734 GO:0005515
Pste6g00173 274 MobiDBLite consensus disorder prediction 205 248 - -
Pste6g00173 274 SUPERFAMILY TPR-like 49 191 IPR011990 GO:0005515
Pste6g00173 274 Coils Coil 169 192 - -
Pste6g00173 274 PANTHER INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6 36 225 - -
Pste6g00173 274 Gene3D Tetratricopeptide repeat domain 46 200 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00173 19 200 Calmodulin-binding Proteins AT3G25230 31.868 4.33e-22 93.6