Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00172 ATGGATATGCATTCAGGAGATGATGATCACACTCATGGAGGACATAACAGCATGAAGATGCACATGAGCCTCTATTGGAGCAAAGATGCAATAGTACTTTTCTCAGGGTGGCCTAAGCACAGTGTTGGCCACTACATCTTAGCCCTTTTGTTTGTGTTTTTCCTTGCTATGATTGCTGAACTTATCTCCAACAAGCCCTACATCAAACATGGGACTAACCCTATCATAGGAGGGCTGGCTCAAGCAACCTTCTTTGTCTTCCGCATAACTTTTCTTTACTTGCTCATGCTTGCTGTCATGTCCTTCAATTTGGGAATCTTCATTGCTGCTGTGGCTGGCCATACCTTTGGCTTCTTCCTTTCCAAGTGTTATGCTATTGCTCTTGCCAATAGAGAACACAGGTCCTCCTCGGTTTCTGAAAAAGTTTAA 429 0.4359 MDMHSGDDDHTHGGHNSMKMHMSLYWSKDAIVLFSGWPKHSVGHYILALLFVFFLAMIAELISNKPYIKHGTNPIIGGLAQATFFVFRITFLYLLMLAVMSFNLGIFIAAVAGHTFGFFLSKCYAIALANREHRSSSVSEKV 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00172 142 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 12 128 IPR007274 GO:0005375|GO:0016020|GO:0035434
Pste6g00172 142 Pfam Ctr copper transporter family 22 63 IPR007274 GO:0005375|GO:0016020|GO:0035434
Pste6g00172 142 Pfam Ctr copper transporter family 74 120 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00172 Pste-Chr6 559791 560219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00172 25 120 Inorganic Solute Cotransporters AT3G46900 47.423 2.51e-25 92.8