Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00141 ATGGAGACTCGTGCTGCCACAAAGAGAAAGGCCGCCACCGTCACCGCGGTTGTGACGGTTGAAAAACAACACCCCAAGAGACAGCGTGTTGTGTTGGGTGAACTTCCCAATCTACCAAACCTTATTGTCCACGAAACTCAATATAAGTGCAAAGAGAACCTTCAATGTCTGAAAAATCCCAATTTGAAGCAACCATCTTCCACAATCGCCACCCTTTCGTCCCCCCAGATTGACCAATCTCATGTTTTGTCACTAAGTCCTGTCAGTAAATCAAGGCTTCAGTTGCTGGGAATTTCATCTATGCTCATTGCAGCCAAGGCACAGGTTGTTGAGATGGAAGCTGACATACTTAAGTCCCTAAAGTTTGAAATGGGAAATCCTACTGTAAACACCTTTCTAAGGAGGTTTGCAGAAGTTGCTTCTGAGAATCAAATAACCCCAAATTTGCAGTTAGATTTTTTGATTGGCTACCTTGCTGAGCTAAGTTTATTGGAGTATGATTGTTTAAGATTCTTGCCCTCAATTATTTCTTCCTTGTGTGAATGCTCCGGTTACAGACCAGCTGAGCTGAAAGAATGTGTCCTCATCTTGCATGACTTGTATTTGTCAAGAAAGGCAGGGTCTTTCAAAGCAATTCGGCAGAAATACAAGCAACACAAGTTCAAATACGTGGCAAATCTTCCTTCTCCTCCACATGTACCGAGTTATTACTTTGAAGATCAGTGATGCAGTGAAAATTCCTTGATAAATGAAACTCATTTGAAAAACACAAGGCTTTTTGAAGTGGACTATTCCAGTGAAAGTTGGTATCTTTTAAATCATGTTTGACGAAACATTTGTGGATTAGTATGGTTTGGATGGACAATCAAAGATAACGTTGTCCATCCAAACAATGGTCGAACAAACCTCACTTATGGACACATGTTTCAGCAGAATGGATAGATACCAATGTTTAATTGCCTTTCCTGTTGAACTATGATGAAAAAGGCTCAATTAACAAGATCTTAGATTGAAGGAATGGTACTTGAGTTTGAAGGATTTGAACAAAATCACTTTGGGTAAAATGGTATTTGAGATCTGCTTGGCATCTTTGGCATCATTGATCCAAATGATGTTGGTTCCAATCTGATGGGGGATTGAGTGATTCTACCAAGAAAGCACAAGGGTGTTACACTGCTTCCAAGAAGGAATATAAGTGATTCAACACATCTGAATCTGCTATTCATTTTGTTTGTATCAATTTTGAAGTCTTCTAAATCAGAAATGTAATTCTTGGACTTATTGTGATCAAAACTGGTGATCACATTAAGCTTATTCACTAATGAAGTTTGCATGTATAAATGTCAAAATTGTATTTACTCTGATAGTTTGGGGTGAAAGGGATATATAAA 1391 0.3868 METRAATKRKAATVTAVVTVEKQHPKRQRVVLGELPNLPNLIVHETQYKCKENLQCLKNPNLKQPSSTIATLSSPQIDQSHVLSLSPVSKSRLQLLGISSMLIAAKAQVVEMEADILKSLKFEMGNPTVNTFLRRFAEVASENQITPNLQLDFLIGYLAELSLLEYDCLRFLPSIISSLCECSGYRPAELKECVLILHDLYLSRKAGSFKAIRQKYKQHKFKYVANLPSPPHVPSYYFEDQ 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00141 241 Pfam Cyclin, C-terminal domain 127 178 IPR004367 -
Pste6g00141 241 Gene3D - 126 178 - -
Pste6g00141 241 SUPERFAMILY Cyclin-like 107 234 IPR036915 -
Pste6g00141 241 Gene3D - 179 234 - -
Pste6g00141 241 PANTHER CYCLINS 83 218 IPR039361 -
Pste6g00141 241 Gene3D - 106 125 - -
Pste6g00141 241 SMART Cyclin_C_2 127 230 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00141 Pste-Chr6 438808 441777 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00141 3 85 Core Cell Cycle Gene Families AT5G43080 39.286 1.21e-06 47.0