Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00138 CAAACGAGCATAGAGAAAAGCATAGAACAATCCGAAATGGCAAAGCGGGAAACCTCAGATTCCGAATCCGAGGATGCCTCAAGCTCAGGAGCTGAGGATGCACAAACGGTGCGCAACGGGAAGAAGGGCGTGTCGGAGTACGAGAAACAGAGGCTGTCGAGAATCGCGGAGAACAAAGCGAGGTTGGAGGCTCTGGGCTTGCCCCAAATGGCTTCTTCATTCAAGGCTTCGACACATCACAGCGTTAACAAGGGCAAAGAGAAGGTTAAAAATGATGATGATGAAGAGTATGTGCCTGAAGAAGACGAGGCAGAACCCGGTTCAACTTCTTCGAGTCAACAAGACGAGGACTTTGAACTTCAAAATGCTTCTGCCTCACGAAAAAGGAAGGTAAAGGGCAAAGGTTTGAAAAAGAAAGCTGGAGTCTCTGGGAAGAAGCATGTTAATAATTCAGAGTACATTGATTGTGATGATGAAGATGAAGCTTTGAGAAAGGCAATTGCTCTTTCCTTGCAAGACTCTGCAGCAGGTTCATATTTGCCTGACAAGAATGTAGTGAAAACTAGCAAGACTGAGATAAAGGGAAACACTCCTGTTCAAGAAGAAAAGGGAAGAAAGAAGAACAAGAAATCGTTTGCTAGTCGACTGCAACTGACTGAGGATGAGCTCATTGTACACTTCTTCCAGCTTGATGGGAAGTTGTGGCATACAGAAGCAGGAAATGGAACTGTAAACGTGAGGGATTTACAAAGGGCAGCCACAGCTCATGATTTTTTATGGACAGACAAAGAATTGGTTGATATGATTCGCTTCTTTGATGATGATGGAGATGGAAAGCTAAGCCTTGATGATTTCCGGAAGATTGTTGTTCGGTGCAACTTGATTAAAGGGTCTTGAAAATCTTGATTGAATCAAGGTTAGACATAGAGATTATAGCATATTGGAAGATAAACAAAATGACTAGATATGCATACCAATGAGTCCTTGTTCTCATTTTGATAAAGGGGTCAAGGCCATGATCACTATAAGAACTGTTTAATGTACATACATATATATGCCATGGAATGAGAAATTTCTAGTAATCCACCTTGTATCCCATTATCACATCACCATATAACTGTTGTACTATGTTGCTTTTCCTTTTCTGTTTGCTTTGTAACTTTGTTGAGCTAATAGCGTTCATTTTTACAGTAAAATTTATTTTAGTGGCCTGTAATTTGATACTTAATCTCCTA 1235 0.4097 MAKRETSDSESEDASSSGAEDAQTVRNGKKGVSEYEKQRLSRIAENKARLEALGLPQMASSFKASTHHSVNKGKEKVKNDDDEEYVPEEDEAEPGSTSSSQQDEDFELQNASASRKRKVKGKGLKKKAGVSGKKHVNNSEYIDCDDEDEALRKAIALSLQDSAAGSYLPDKNVVKTSKTEIKGNTPVQEEKGRKKNKKSFASRLQLTEDELIVHFFQLDGKLWHTEAGNGTVNVRDLQRAATAHDFLWTDKELVDMIRFFDDDGDGKLSLDDFRKIVVRCNLIKGS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00138 286 Pfam Ubiquitin interaction motif 146 162 IPR003903 -
Pste6g00138 286 MobiDBLite consensus disorder prediction 115 132 - -
Pste6g00138 286 CDD EFh 228 277 IPR002048 GO:0005509
Pste6g00138 286 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 146 165 IPR003903 -
Pste6g00138 286 ProSiteProfiles EF-hand calcium-binding domain profile. 248 283 IPR002048 GO:0005509
Pste6g00138 286 SMART efh_1 252 280 IPR002048 GO:0005509
Pste6g00138 286 ProSitePatterns EF-hand calcium-binding domain. 261 273 IPR018247 -
Pste6g00138 286 Pfam EF-hand domain pair 236 279 IPR002048 GO:0005509
Pste6g00138 286 Gene3D - 138 199 - -
Pste6g00138 286 MobiDBLite consensus disorder prediction 93 108 - -
Pste6g00138 286 Gene3D - 205 281 - -
Pste6g00138 286 MobiDBLite consensus disorder prediction 1 38 - -
Pste6g00138 286 SUPERFAMILY EF-hand 227 280 IPR011992 -
Pste6g00138 286 MobiDBLite consensus disorder prediction 61 132 - -
Pste6g00138 286 MobiDBLite consensus disorder prediction 177 197 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00138 32 286 EF-hand Containing Proteins AT1G73440 41.176 7.65e-48 158