Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00129 ATGAAGGCCATGCCCTTTCCTTTTGAGGAGTTCCAAGGGAAGGGAGTGTTGGATTTCTCTTCAGCATCAGATTCATTTTCACTGCTTTTGCATCATCCACAACCAAAATGGACCACAGACAAAGAGGACTATTGCTATGTGGGCACTGAGCCCACCTCAGTTCTTGACACCAGAAGAAGCCCAAACTCTTCCACCATGTCCTCTTCCCTTGGCAGCAGCAACACCATAAGCAAAGGTGGAAGTGGTGGCTCAACCAATAACACCACTTGTTATACTCCAACTGTTTCTCAGAACCCTCCTCAGGCAGCATTGGAAGCAAGCATAGAAAAATGTGGTGTCAGAATGGAGGACTGGGAGGGTCAAGATCAATCCATTCTGAGACTAATTATGGGAGATGTTGAATACCCTTCTGCAGGGTTGAACAAACTCTTCCAAGGCAGTGCCTGTGGCCCTCAGCAAAGTGTTGATTTCAATGCAGGTTTTGGTGTTGTGGATCAAGGTTTGAATATGCTAAGTATTGTTGACCCTTCAGGGAATTACCCTGGTTTCCCTTTTAATATAGATGCCCACAATGGTAAGAATGGTTCTTTTTCTGTTGAAGAATCAATGTTTTCTGTTTCTGGTAACAATCCTTTGATTCTGTCAACACCTCCCGGTGGGTTTAATTCTCAGCAGCAAGTGATTGGGGAGGTAGATGAGAAACCTCAAGTCATCAATCCCCAGTTTGTGTTGAACCAGAATCAAGTTCAATTCACAGAGAACCCTTCTTTCTTTGTGCCAACTATGTACCCCCAATTGCAGGAGCAGCAAGTTTTTTCTCAGTCTCAAGTGAAACGCCAGGTTTTTGAACCTGTTGGGCTCAATTATCAGGCTCCAAGGTTGCCCCTTTTGGACTCAGGGCAAGAGGTGTTTGGTAGGAGGCAGCAAACACAGCTTCCATTGTTTCCTCACCAAATGCAACCACAGATTGTGCCATCTGCTAAACAGCAGAAGGCGAGTTCCACCGGAGAAGATGCAAGCCACCTGCTTCAGCAGGCTATATTTGACCAGCTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCAAGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCAATTGGTAAGCCTTTTCAGAGGGCTGCTTTCTACATGAAGGATGCCTTGATGTCACTACTTCATTCAAATGTTCACAATGTCTTGGCCTTCTCACCCATTAGTTCCATATTCAAAATTGGAGCATATAAGTCCTTTTCTGAGATATCACCTGTTATTCAGTTTGCCAGCTTCACTAGTAATCAATCAATCACTGAAGCTGTGGAAAGGTTTGATCGAATTCACATTATCGATTTTGATATCGGATTTGGAGTGCAATGGTCTTCTCTTATGCAAGTGCTTGCCATGAGGAGTAATGGTGTGCCTTCACTCAAAATCACTGTCATTGTATCACCCCTAACTTGTGATGAGTTTGAGCTCAATGTAACTCAAGAAAAGTTGAACCAATACGCCAAAGACATCAACATGTCTTTTGAGCTCAATGTTTTAAGCATTGAGTCATTGAACACTCCTTCATGTCCACTATCTGGCCAGTTCTATAATAATGAGGCAATTGCAGTGAACATGCCACTTTCTTCATTCACAAACTACCCATCAATGTTTCCCACGGTCCTTCGGTTTGTAAAGCAGCTTAGGCCAAAAGTGGTTGTCACTACTGATAGAAACTGTGACCGAATTGATGTCCCATTTTCCACCAATGTAGTCCATGCTCTTCACAGTTACTCAGCCTTGCTTGAATCACTTGATGCTGTGAATGTGAACCTAGATGTACTCCAAAAGATAGAGAAGCATTTCATCCTGCCAGCACTTAAGAAGATCATAATAGGTCCCCTCCATTCACAAGAAAAATTTCCAACTTGGAGGAACATGTTTCTTCAATATGGCTTCTCTCCATTCACATTTAGTAACTTCGCAGAAGCTCAAGCCGAGTGTTTAGTGCAGAAGGCACCTGTAAGTGGATTTCAATTGGAGAGAAAACACTCCTCTCTTGTTCTATGCTGGCAGAGGAAAGAACTTATCACTGTTTCCACTTGGAGATGCTGA 2118 0.4367 MKAMPFPFEEFQGKGVLDFSSASDSFSLLLHHPQPKWTTDKEDYCYVGTEPTSVLDTRRSPNSSTMSSSLGSSNTISKGGSGGSTNNTTCYTPTVSQNPPQAALEASIEKCGVRMEDWEGQDQSILRLIMGDVEYPSAGLNKLFQGSACGPQQSVDFNAGFGVVDQGLNMLSIVDPSGNYPGFPFNIDAHNGKNGSFSVEESMFSVSGNNPLILSTPPGGFNSQQQVIGEVDEKPQVINPQFVLNQNQVQFTENPSFFVPTMYPQLQEQQVFSQSQVKRQVFEPVGLNYQAPRLPLLDSGQEVFGRRQQTQLPLFPHQMQPQIVPSAKQQKASSTGEDASHLLQQAIFDQLYKTAELIEAGNPVQAQGILARLNHQLSPIGKPFQRAAFYMKDALMSLLHSNVHNVLAFSPISSIFKIGAYKSFSEISPVIQFASFTSNQSITEAVERFDRIHIIDFDIGFGVQWSSLMQVLAMRSNGVPSLKITVIVSPLTCDEFELNVTQEKLNQYAKDINMSFELNVLSIESLNTPSCPLSGQFYNNEAIAVNMPLSSFTNYPSMFPTVLRFVKQLRPKVVVTTDRNCDRIDVPFSTNVVHALHSYSALLESLDAVNVNLDVLQKIEKHFILPALKKIIIGPLHSQEKFPTWRNMFLQYGFSPFTFSNFAEAQAECLVQKAPVSGFQLERKHSSLVLCWQRKELITVSTWRC 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00129 705 MobiDBLite consensus disorder prediction 55 89 - -
Pste6g00129 705 ProSiteProfiles GRAS family profile. 338 704 IPR005202 -
Pste6g00129 705 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 324 700 IPR005202 -
Pste6g00129 705 Pfam GRAS domain family 349 704 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00129 Pste-Chr6 398095 400212 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00129 346 705 GRAS Transcription Factor Family AT4G00150 55.923 2.51e-129 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste6g00129 GRAS 6.6e-92 CL0063