Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00110 ATGAAGGCCATGCCCTTGCCTTTTGAGGAATTTCAAGGGAAGGGAGTGTTGGATTTCTCTTCAGCCCCAGATTCATTTTCACTGCTTTTGCATCATCCACAGGCAAAGTGGACCATAGACAAAGAGGATTATTGCTATGTGGGCAGCACTGAGCCCACCTCAGTTCTTGACTCCAGAAGAAGCCCAAGCCCTCCCACTTCCTCCTCCACAATGTCCTCTTCTCTTGGCAGCAACAGCACCAGCAAGGGTGGTGGCAGTGGCACTTCTGCCAACACCACCACCACTGGTGCTGCTGCAGCCCCCACAGCCTCTGACACCAACCCTCCTCAGGAATCCAGCCCTGACAAATGTGGCATCAGGATGGAGGACTGGGAGGGTCAAGATCAATCCATCCTGAGGCTAATCATGGGGGATGTTGAAGACCCTTCTGCTGGATTGAGCAAGCTCTTGCAAAGCACTGCCTGTGGCTCTCAAAGTGTTGATTTCAATGCAGGCTTTGGTGTTGTGGATCAAGGCTTGAATATGGTGAGTGCTAGTATTGACCCCTCAGTGAATTACCCTTCTGGTTTCCCTTTCATTGCTGAGAATATTGATGGACATAGTGCCAAGGTTGGTACTGGTATTGGGACTGGTCAGGTTTCAGAATCTGTTTTCTCTGCTAACAATCCTCTTATGGTGTCATCATCTGTGTCTCCTGGTGTGTTCACTTCTCAGCAGCAGCAGGAGTTTGGAGTGGTGGATGAGAAGCCTCAGGTTATCAACCCCCAGTTTATGTTAAACCAAAACCAAGTTCAGTTCTCAGAGAATCCTTCTTTTTATGTGCCATTGATGTACCCCCAAGTGCAGGAGCAGCAGGTATTCTCCTCTCAGCATCAATCAAAGCGGGCTCTCTTTGACACAATTGGGCACAATTATCAGGCTCCAAGGTTACCCCTTTTGGATTCAGGGCAAGAGGTGTTTGGTAGGAGGCAGCTTCCATTGTTTCCTCACCATATGCAACAGCAGCAATCAATGGTTATGCCATCTGCTAAACAGCAGAAGGTGAGTTCCGCCGGAGACGATGCAAGCCACCAGCTTCAGCAGGCTATATTTGATCAATTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTACATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCAATTGGTAAGCCTTTTCAGAGGGCTGCTTTCTACATGAAGGAGGCCTTGATGTCACTGCTTCATTCAAATGCTCACAATTTCATGGCTTTTTCCCCAATTAGTTTCATATTCAAAATTGGAGCTTATAAGTCCTTTTCTGAGATATCACCTGTTCTTCAGTTTGCCAATTTTACTTGCAACCAAGCCATCATTGAAGCTGTTGAAAGGTTTGACCGAATTCATGTTATTGATTTTGATGTTGGGTTTGGAGTGCAGTGGTCATCTTTTATGCCAGAGCTTGCCTTGAGAAGTAATGGTTCACCTTCACTCAAAGTCACTGCCATTGTATCACCCTCCACTTGTGATGAGGTTGAGCTCAATTTCACTAGAGAGAATTTGATTCAATATGCCAAAGACATCAATGTGTCGCTAGAGTTCAATGTTTTGAGCATTGAATCATTGAACTCTCCTTCTTGTCCTCTGCTTGATCAATTCTATGATAACGAGGAAATTGCTGTGAATATGCCAATTTCTAGTTTCAGAAACTATCCATCATTGTTCCCTTCGGTTCTTCACTTTGTGAAGCAGCTCAGGCCAAAAGTTGTTGTCACTTTAGACAGAATTTGTGATCGAATTGATGTACCGCTTCCCACCAATGTAATTCATGTTCTCCAATGTTATTCGGCCTTGCTTGAATCGCTTGATGCAGTGAATGTGAATCTTGATGTCCTCCAAAAGATTGAGAGGCATTTTATCCAGCCAGCCATCAAGAAAATTATTCTTGGCCACCACCATTCCCAAGAAAAACTACCCCCATGGAGGAACCTCTTTATACAATCTGGATTCACTCCATTCACATTCAGCAACATCACACAAGCTCAAGCTGAGTGTTTAGTTCAGAGGGCACCTGTAAGGGGATTTCATGTGGAGAGAAAGCCTTCATCTCTTGTTCTATGCTGGCAGAGGAAAGAACTCATCTCAGTTTCTACCTGGAGATGCTGA 2166 0.4552 MKAMPLPFEEFQGKGVLDFSSAPDSFSLLLHHPQAKWTIDKEDYCYVGSTEPTSVLDSRRSPSPPTSSSTMSSSLGSNSTSKGGGSGTSANTTTTGAAAAPTASDTNPPQESSPDKCGIRMEDWEGQDQSILRLIMGDVEDPSAGLSKLLQSTACGSQSVDFNAGFGVVDQGLNMVSASIDPSVNYPSGFPFIAENIDGHSAKVGTGIGTGQVSESVFSANNPLMVSSSVSPGVFTSQQQQEFGVVDEKPQVINPQFMLNQNQVQFSENPSFYVPLMYPQVQEQQVFSSQHQSKRALFDTIGHNYQAPRLPLLDSGQEVFGRRQLPLFPHHMQQQQSMVMPSAKQQKVSSAGDDASHQLQQAIFDQLYKTAELIEAGNPVHAQGILARLNHQLSPIGKPFQRAAFYMKEALMSLLHSNAHNFMAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQAIIEAVERFDRIHVIDFDVGFGVQWSSFMPELALRSNGSPSLKVTAIVSPSTCDEVELNFTRENLIQYAKDINVSLEFNVLSIESLNSPSCPLLDQFYDNEEIAVNMPISSFRNYPSLFPSVLHFVKQLRPKVVVTLDRICDRIDVPLPTNVIHVLQCYSALLESLDAVNVNLDVLQKIERHFIQPAIKKIILGHHHSQEKLPPWRNLFIQSGFTPFTFSNITQAQAECLVQRAPVRGFHVERKPSSLVLCWQRKELISVSTWRC 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00110 721 MobiDBLite consensus disorder prediction 52 113 - -
Pste6g00110 721 ProSiteProfiles GRAS family profile. 354 720 IPR005202 -
Pste6g00110 721 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 334 716 IPR005202 -
Pste6g00110 721 MobiDBLite consensus disorder prediction 52 120 - -
Pste6g00110 721 Pfam GRAS domain family 365 720 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00110 Pste-Chr6 341786 343951 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00110 362 721 GRAS Transcription Factor Family AT4G00150 54.270 6.75e-126 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste6g00110 GRAS 1e-90 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00300 5 2021990 2033549 Pste6g00110 6 341786 343951 PCT