Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00105 ATGGAAACAAAGAAGTGTAACAAGATCAGAGAGGTGGTTAGGCTTCAACAAATCATCAAGAAATGGAAGAAAGTTGCAATTGCTTCCAACAACAGCTCCTCTACTTCCACCAGTTGTAAAGGCATAAAGTTTTTAAAACGAACTGTGTCATTCACAGATGTTTCTTCCAACAATGACATGGTTCCAAAAGGTTTCCTTGCTGTTTGTGTAGGGAAAGAGCTCAAGAGATTCATTATTCCCACCCATTATTTGAGACACCAAGCATTTGAGATTCTGCTCCAAGAAGCTGAAGAGGAATTTGGTTTCCAGCAAGAGGGTGTGCTCAAAATCCCATGCCAAGTGTCAGTGTTCGAGAAAATATTGAAGACCGTAGAAGAGAACAAATTAAGAACCATTGCATGA 402 0.398 METKKCNKIREVVRLQQIIKKWKKVAIASNNSSSTSTSCKGIKFLKRTVSFTDVSSNNDMVPKGFLAVCVGKELKRFIIPTHYLRHQAFEILLQEAEEEFGFQQEGVLKIPCQVSVFEKILKTVEENKLRTIA 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00105 133 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 35 120 IPR003676 GO:0009733
Pste6g00105 133 Pfam Auxin responsive protein 20 123 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00105 Pste-Chr6 313564 313965 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00105 1 126 Calmodulin-binding Proteins AT2G24400 63.158 1.66e-53 164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00105 6 313564 313965 Pste6g00105 6 313564 313965 ECH