Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste6g00054 | GTTATAGTTATAAGATAAGACTTAGATAACTGTTTGCTTCCACATATTATACCGGCGCACAATGGTGTCTCTACTTCTATTTCTGTGCCTTACTCTTCCTGTGCTTTTGTTATTCTTCTTCCAATTTAGCAGAAACCTCAAGAAACCACACCTTCCACCAGGTCCTAGAGGCGTTCCTATAATAGGGAATCTTCTTCAGCTCAATAACTCTTCTCTTTATCTACATCTATGGCAACTTTCAAAGAAATATGGGCCTATATTTTCCCTTCAATTAGGTTTACGACCAGCCATAGTTATTTCCTCACCAAAATTGGCCAAAGAGCTAACGAAAGACCATGACCTTGTAGTTAGTGATCGACCAAAATTACTTGGCCAACAGAAATTGTCCTACAATGGGTTAGAGATGATATTTTCCCCATATGGTGAGTTTTGGAGAGAAATTAGAAAAATTTGTGTTGTTCACGTTCTTAGCGCTAGACGTGTCTCATCATTTTCCTCAATAAGACAATTTGAGGTCAAGCAAATGATAAAAAAGATATCTGGGCATGCCTCATGTTCAAAGGTTATAAACTTGAATGAACTACTAATGTCTCTTACTAGCACAATTATATGTAGAACTGCCTTTGGGAGGAGGTATGATGAAGAAGGAGCTGAAAGGAGTAGGTTCCATGGGCTATTCAGTGAGTGTCAGGCCATGTGGGCAACCTTGTTTTTCTCAGATTATATTCCATTCTTCGGTTGGATTGACAAACTGAGGGGACTACATGCACGTCTTGAACGAAATTTCAAGGAGTTGGATAAGTTCTATCAAGAAGTTATTGATGAACACATGGATCCCAATAGAGAGACCACAGAGAACAAGGATATAATAGATGTCTTACTTCAACTCAAGAAGCAGCGTTCATTTTCTGTAGATCTCACAGATGATCACATCAAAGCAGTGCTCATGGACATTCTTGTAGCAGCAACGGATACAACAGCAGCAACGATAGTCTGGGCTATGGTTGCATTGCTAAAAAATCCGAGAGTAATGAAGAAAGTTCAAGAAGAAATTAGGAATTTGGGAGGTGAAAAAAATTTTTTAGATGAAGATGATATTCAAAAGTTTACCTATTTCAAAGCTGTGGTAAAAGAGACACTGAGACTGCATCTACCAGCACCACTACTTGTGCCAAGAGAAACAAACGAACCGTGTATTATAGAAGGCTACAAAATTCCAGCCAAGACAATAGTGTATGTGAATGCTTGGGCAATCCATAGAGACCCTAAGGCTTGGAAAAACCCTGATGAGTTTTTACCCGAAAGGTTCTTAGATAGCACTATAGATTTTCGAGGGCAAGATTTTGAGTTAATTCCATTTGGTGCTGGTCGTAGAATTTGTCCTGGGGTAACTATGGCAGTTGCTTCATTGGATCTGATTCTTGCTAATATTCTTAATTCGTTTGATTGGGAATTGCAAGCTGGAATGAGAGCAGAAGACATTGATACTGAAATGTTACCAGGACTTACTCAGCATAAGAAGCATCCTCTTTATGCTTTGGCCAAGTTTGGAATATAAAATTATGATTAGCAAAAAAGGAACTATTATTATAATGCCGTTTGTAACATGCAATTAGAATAAGGTAGGTAAATAAGGGTACGTTGATGTCATGTGGATTGTTTGGCTTGGTTTAGTGCAAAGTACTTTCCCACTTCCATTTTCATTAATCGTTTGCTTGATTGCTTCCTTTCACACTTGTAGGTCTTATACTAATAATTTTTCGCACATGATTTGTTTCAAAGATAAA | 1787 | 0.38 | MVSLLLFLCLTLPVLLLFFFQFSRNLKKPHLPPGPRGVPIIGNLLQLNNSSLYLHLWQLSKKYGPIFSLQLGLRPAIVISSPKLAKELTKDHDLVVSDRPKLLGQQKLSYNGLEMIFSPYGEFWREIRKICVVHVLSARRVSSFSSIRQFEVKQMIKKISGHASCSKVINLNELLMSLTSTIICRTAFGRRYDEEGAERSRFHGLFSECQAMWATLFFSDYIPFFGWIDKLRGLHARLERNFKELDKFYQEVIDEHMDPNRETTENKDIIDVLLQLKKQRSFSVDLTDDHIKAVLMDILVAATDTTAATIVWAMVALLKNPRVMKKVQEEIRNLGGEKNFLDEDDIQKFTYFKAVVKETLRLHLPAPLLVPRETNEPCIIEGYKIPAKTIVYVNAWAIHRDPKAWKNPDEFLPERFLDSTIDFRGQDFELIPFGAGRRICPGVTMAVASLDLILANILNSFDWELQAGMRAEDIDTEMLPGLTQHKKHPLYALAKFGI | 498 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste6g00054 | 498 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 433 | 442 | IPR017972 | GO:0005506|GO:0016705 | |
| Pste6g00054 | 498 | PANTHER | CYTOCHROME P450 71B11-RELATED | 15 | 494 | - | - | |
| Pste6g00054 | 498 | Coils | Coil | 324 | 344 | - | - | |
| Pste6g00054 | 498 | PRINTS | E-class P450 group I signature | 394 | 418 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00054 | 498 | PRINTS | E-class P450 group I signature | 440 | 463 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00054 | 498 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00054 | 498 | PRINTS | E-class P450 group I signature | 310 | 336 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00054 | 498 | PRINTS | E-class P450 group I signature | 290 | 307 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00054 | 498 | PRINTS | E-class P450 group I signature | 430 | 440 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00054 | 498 | PRINTS | E-class P450 group I signature | 353 | 371 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00054 | 498 | PRINTS | E-class P450 group I signature | 178 | 196 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00054 | 498 | Gene3D | Cytochrome P450 | 25 | 494 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00054 | 498 | FunFam | Cytochrome P450 83B1 | 18 | 493 | - | - | |
| Pste6g00054 | 498 | Pfam | Cytochrome P450 | 32 | 487 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00054 | 498 | CDD | CYP71-like | 62 | 490 | - | - | |
| Pste6g00054 | 498 | PRINTS | P450 superfamily signature | 301 | 318 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00054 | 498 | PRINTS | P450 superfamily signature | 440 | 451 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00054 | 498 | PRINTS | P450 superfamily signature | 354 | 365 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00054 | 498 | PRINTS | P450 superfamily signature | 431 | 440 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00054 | 498 | SUPERFAMILY | Cytochrome P450 | 32 | 494 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste6g00054 | Pste-Chr6 | 164714 | 167585 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste6g00054 | 5 | 490 | Cytochrome P450 | AT4G31500 | 48.057 | 2.20e-169 | 486 |