Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00030 ACCTTCAAGAACTCAACCCTTCCACCTGGTCCTAGAGGCCTTCCCATAATAGGGAATCTTCATCAGCTGAATAGTTCTTCTCTTTATCTGCAACTATGGCAACTCTCAAAGAAATATGGGCCCATATTTTCCCTTCAATTAGGTTTAAGACAAGCCATTGTTGTTACATCACCTAAATTTGCCAAAGCGGTTTTGAAAGACCATGACCTTGAGTGTTGTGGACGACCTAAATTACTTGGCCAGCAGAAATTGTCCTATAAAGGGTTAGACATAGCATTTTCTGCGTACAATAATTATTGGAGGGAAATTAGAAAACTTTGTGTTGTCCATGTCCTTAACTCTAGACGTGTCTCTAGCTTTTTGTCAATAAGACAGTTTGAGGTTAAGCACGTGATAAAAAGCATATCCATGCATGCTTCTTCGTCAAAGGTTACAAATTTGAGTGAAGTGCTAATGTCTCTTACTAGCACTATTATATGTAGAATTGTCTTTGGAAGAAGGTACACAGATGAAGGAATTGAAGGGAGTAAGTTACAAGGGATGCTCTATGAGTGTCAGGCCATGTGGGCAACCTTCTTTTTCTCAGATTATATTCCTTTCTTGGGTTGGATTGATAAACTCATGGGACAGCATGCACGTCTTGAACGGATTTTCAATGATTTGGATAAGTTCTACGAAGAAGTGATTGATGAACACATGCATCCTAATAGAAAGACTCCCGGGAACGAGGATATAATAGATATCTTACTTCAACTGAAGAAGCAACGTTCGTTTCCCAACATGCTTGTAGCAGCAACAGATACAGTTGCAGCAACGACAGTGTGGGTGATGACTGTACTAATAAAAAATCCAAGAGTAATGAAGAAAGTTCAAGAAGAAATTAGAAACTTAGGAGGTACCAAGGATTTTTTAGATGAAGATGTCATTCAAAAGTTTCCATATTTCAGGGCAGTGATAAAAGAGACACTGAGATTGTATCCACCAGCGCCAATACCAATGCCAAGAGAAACAAATGAAGTATGTATTATAGATGGCTACAAAATTCCAGCCAAGACTATAGTGTATGTGAATGTTTGGGCTATTCAAAGAGACCCAATGTCATGGAAAGACCCAGATGAGTTTTTACCAGAGAGGTTCTTAGATAATACAACAGATTTTCGAGGACAACACTTTGAGTTAATTCCATTTGGTGGTGGCCGTAGAATTTGCCCTGGTATGCCTATGGCAGTTGCCTTGTTGGATATTATTCTTGCTAATCTCCTAAACTCATTTGATTGGGAATTGCCACCAGGAATGAAAAGAAAAGACATTGATACTGAAGTGTTACCAGGACTTACCCAGCATAAGAAGAATCCTCTGTGTCTTTTGGCCAAGTGTCGAATC 1383 0.3919 TFKNSTLPPGPRGLPIIGNLHQLNSSSLYLQLWQLSKKYGPIFSLQLGLRQAIVVTSPKFAKAVLKDHDLECCGRPKLLGQQKLSYKGLDIAFSAYNNYWREIRKLCVVHVLNSRRVSSFLSIRQFEVKHVIKSISMHASSSKVTNLSEVLMSLTSTIICRIVFGRRYTDEGIEGSKLQGMLYECQAMWATFFFSDYIPFLGWIDKLMGQHARLERIFNDLDKFYEEVIDEHMHPNRKTPGNEDIIDILLQLKKQRSFPNMLVAATDTVAATTVWVMTVLIKNPRVMKKVQEEIRNLGGTKDFLDEDVIQKFPYFRAVIKETLRLYPPAPIPMPRETNEVCIIDGYKIPAKTIVYVNVWAIQRDPMSWKDPDEFLPERFLDNTTDFRGQHFELIPFGGGRRICPGMPMAVALLDIILANLLNSFDWELPPGMKRKDIDTEVLPGLTQHKKNPLCLLAKCRI 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00030 461 CDD CYP71-like 38 453 - -
Pste6g00030 461 Pfam Cytochrome P450 8 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00030 461 PRINTS E-class P450 group I signature 273 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00030 461 PRINTS E-class P450 group I signature 36 55 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00030 461 PRINTS E-class P450 group I signature 357 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00030 461 PRINTS E-class P450 group I signature 154 172 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00030 461 PRINTS E-class P450 group I signature 60 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00030 461 PRINTS E-class P450 group I signature 403 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00030 461 PRINTS E-class P450 group I signature 316 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00030 461 PRINTS E-class P450 group I signature 393 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00030 461 FunFam Cytochrome P450 83B1 1 456 - -
Pste6g00030 461 Gene3D Cytochrome P450 2 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00030 461 SUPERFAMILY Cytochrome P450 8 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00030 461 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 396 405 IPR017972 GO:0005506|GO:0016705
Pste6g00030 461 PRINTS P450 superfamily signature 394 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00030 461 PRINTS P450 superfamily signature 317 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00030 461 PRINTS P450 superfamily signature 264 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g00030 461 PANTHER CYTOCHROME P450 71B11-RELATED 5 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00030 Pste-Chr6 88585 91109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00030 1 455 Cytochrome P450 AT4G31500 45.435 1.64e-151 439