Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste6g00026 | TAGGGACGTGGTTTCGTTCTAATATAAAATTCATGACATACTGCTTTCTTTCCACCACTTAATTATAATAATGATTTCACCGGTTCTAATTCTATGCCTTATCCTTCCTTTGCTTTTGTTATTCTTCTTCCAATGTTGCAGAACCTTTAAGAACTCACCCCTTCCACCTGGTCCTAGAGGCCTTCCCATAATAGGAAATCTTCATCAGCTCAATAATCCTGAACTTTGTCGGCAACTATGGCAACTCTCAAAGAAATATGGACCTATATTTTCCCTTCAATTAGGTTTAAGACCAGCCATAGTTGTTTCCTCCTCAAAAGGGGCCAAAGAGCTAATGAAAGACCATGACCTTGTAGTTAGTGATCGACCAAAATTACTTGGCCAGCAGAAATTGTCCTACAATGGGCTAGAGATGATATTTTCCCCATATGGAGAGTTTTGGAGAGAAATTAGAAAAATTTGTGTTGTTCATGTTCTTAGCTCTAGGCGTGTCTCAAGATTTTCCTCAATAAGACTGTTTGAGGTAAAGCAGATGATAAAGAAAATATCTCGGCACGCCTCATCTTCAAAGGTTACTAACTTGAATGAAGTGCTAATGTCTCTTGGTAGCACTATTATCTGTAGAATTGCCTTTGGGAGAAGGCATGAGAATGGAGGAACCGAAAGGAGTAAGTTCCATGGGCTTCTGAATGAGGTTCAGGCCCTGTGGGCCACCTTGTTTTTCTCAGATTATATTCCATTCTTAGGTTGGATTGATAAACTGAGGGGACTGCATGCACGTCTTGAACGTACTTTCAAGGAGATGGATAAGTTCTACCAAGAAGTGATTGATGAACACTTGGATCCTAACAGAAAGACTCCGGAGGAGGAGGATATAACAGATGTTTTACTTCAACTGAAGAAACAGCGTTCGTTTTCTGTGGATCTCACAAACGATCACATTAAAGCTGTCCTAATGATGCTTGTAGCAGCAACGGATACGACTGCAGCCTCAACAGTGTGGGCTATGACTGCACTATTAAAAAATCCAAGAGTAATGAAAATAGTCCAAGAAGAAATCAGGAATTTGGGAGGAAAAAAAGAGTTTTTAGATGAAGATGATATTCAAAAGTTTCCCTATTTCAAGGCCGTGAAAAAAGAGACACTGAGAATGTATCCACCAGCACCACTACTTGCCCCAAGAGAAACAAATGAAGCATGTATTATAGATGGTTATGAAATTCCAGCCAAGACAATAGTGTATGTTAATGCTTGGGCTATCCATAGAGACCCCAAGGCTTGGAAAGACCCAGATGAGTTTCTTCCCGAGAGGTTCTTAGATAATAATATAGATTTTCGAGGGCTGGATTTTGATTTCATTCCATTTGGTGCTGGTCGTCGAATCTGCCCTGGTATGCCTATGGCCATTGCCTCAATGGATCTTATTCTTGCCAATCTTCTTAATTCGTTTGATTGGGAATTGCCGGAAGGAATGACAGAAGAAGACATTGATACTGAAATGTTGCCAGGTCTTGCTCAGCATAAGAAGAATCCTCTCAATGTTTTGGCTAAATGTCCAATCTAAAATTTGATTAATAAAACTGTGTTAGTGTTGTTTGTACCCAGCCTAAGAGTTAGGTAAATAAAAGCATGTTCTTGTAATGTGGATTGCCTGGCCATGTATATGTGTTTATATATACACACATGAGAACATGGTAATATATATTTGGAGTATGTAGCATTTTACAATAATAATTTTGAGCAAAATAATTAATTACCACATAATAATTTTTCTTATACA | 1780 | 0.386 | MISPVLILCLILPLLLLFFFQCCRTFKNSPLPPGPRGLPIIGNLHQLNNPELCRQLWQLSKKYGPIFSLQLGLRPAIVVSSSKGAKELMKDHDLVVSDRPKLLGQQKLSYNGLEMIFSPYGEFWREIRKICVVHVLSSRRVSRFSSIRLFEVKQMIKKISRHASSSKVTNLNEVLMSLGSTIICRIAFGRRHENGGTERSKFHGLLNEVQALWATLFFSDYIPFLGWIDKLRGLHARLERTFKEMDKFYQEVIDEHLDPNRKTPEEEDITDVLLQLKKQRSFSVDLTNDHIKAVLMMLVAATDTTAASTVWAMTALLKNPRVMKIVQEEIRNLGGKKEFLDEDDIQKFPYFKAVKKETLRMYPPAPLLAPRETNEACIIDGYEIPAKTIVYVNAWAIHRDPKAWKDPDEFLPERFLDNNIDFRGLDFDFIPFGAGRRICPGMPMAIASMDLILANLLNSFDWELPEGMTEEDIDTEMLPGLAQHKKNPLNVLAKCPI | 497 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste6g00026 | 497 | FunFam | Cytochrome P450 83B1 | 19 | 492 | - | - | |
| Pste6g00026 | 497 | Pfam | Cytochrome P450 | 32 | 487 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00026 | 497 | PRINTS | P450 superfamily signature | 439 | 450 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00026 | 497 | PRINTS | P450 superfamily signature | 430 | 439 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00026 | 497 | PRINTS | P450 superfamily signature | 353 | 364 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00026 | 497 | PRINTS | P450 superfamily signature | 300 | 317 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00026 | 497 | CDD | CYP71-like | 62 | 489 | - | - | |
| Pste6g00026 | 497 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00026 | 497 | PRINTS | E-class P450 group I signature | 393 | 417 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00026 | 497 | PRINTS | E-class P450 group I signature | 429 | 439 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00026 | 497 | PRINTS | E-class P450 group I signature | 84 | 105 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00026 | 497 | PRINTS | E-class P450 group I signature | 178 | 196 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00026 | 497 | PRINTS | E-class P450 group I signature | 289 | 306 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00026 | 497 | PRINTS | E-class P450 group I signature | 309 | 335 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00026 | 497 | PRINTS | E-class P450 group I signature | 439 | 462 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00026 | 497 | PRINTS | E-class P450 group I signature | 352 | 370 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00026 | 497 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 432 | 441 | IPR017972 | GO:0005506|GO:0016705 | |
| Pste6g00026 | 497 | SUPERFAMILY | Cytochrome P450 | 32 | 493 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste6g00026 | 497 | PANTHER | CYTOCHROME P450 71B11-RELATED | 16 | 494 | - | - | |
| Pste6g00026 | 497 | Gene3D | Cytochrome P450 | 25 | 495 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste6g00026 | Pste-Chr6 | 79603 | 82117 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste6g00026 | 18 | 493 | Cytochrome P450 | AT4G31500 | 48.333 | 1.13e-162 | 468 |