Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00024 AGATACGAAGACTTTGTGGTTTGAAAATTTGTTTGCTTTTCTTCAAAATGTCAAGTCTTCAGATGTGTCATTTGGATTTGGAGCAAGGGAGTCACCACCGTTCTGTGAGTGGCAGTGACATGAGCATGTGCTTTTCTGATGCTGAGAATGGTTCTTGCTATTCTCATTTCTATTCAACAAATGGTGACCCTTATGATGATTACACCTTTGCTTGTGTTTCTGATGCTGAGGGTGGTGGGGTGTTGCTGGTTCCACAAGGGCTTCTTCTGTCTCTGATTTTGGAAATTGAAAGTGGGGTTCCTGAAATTAAGGTTCATTTGGCCAAGTTGGAGAAGGATTGCAGGATTTGTCATCTTGGTTTGGAGAGTGATGTTCAAGAGTCTGGAGTCCCCATAGAATTGGGGTGTTCTTGTAAGGATGATTTAGGGTCAGCTCACAGGAACTGTGCTGAGACTTGGTTCAAGATTAAGGGGAATAGAACATGTGAAATATGTCACTCTGTTGCACGGAATGTTTGTGGGGCAAATGAGGAGACAACACAGACTTTGAATGACAGCAACAATGCTACTGCAGCATCCACAATCTCAACATCATCTCCAACAGCAGAACCTCAAAGATTTTGGCATGGCCATAGATTTCTCAATTTTCTTCTTGCTTGTATAGTTTTTGCATTTGTCATATCATGGCTTTTTCACTTCAACATGCCCTCTTCCTAATTTTCTGAACCATAGCCTTTTTTCACATATAATTTAAAGAAAAGTGAAATTTAATTTAATGGTGGGAGGGAGTGAAGAGAAATAGAAAAAAAAAATAGAAGGGAGAAACCAGAATCTAAAATCTAAAGAGATTGTTACTTAAGGTAACTAATGTTCTTATATTTTATGGTATCACTGGGGCCATGCCTCTATGCAAGTTAACAGTTTGTGAC 928 0.3944 MSSLQMCHLDLEQGSHHRSVSGSDMSMCFSDAENGSCYSHFYSTNGDPYDDYTFACVSDAEGGGVLLVPQGLLLSLILEIESGVPEIKVHLAKLEKDCRICHLGLESDVQESGVPIELGCSCKDDLGSAHRNCAETWFKIKGNRTCEICHSVARNVCGANEETTQTLNDSNNATAASTISTSSPTAEPQRFWHGHRFLNFLLACIVFAFVISWLFHFNMPSS 222
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00024 222 PANTHER ZINC FINGER, RING-CH-TYPE 16 221 - -
Pste6g00024 222 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 153 IPR013083 -
Pste6g00024 222 Pfam RING-variant domain 98 149 IPR011016 GO:0008270
Pste6g00024 222 ProSiteProfiles Zinc finger RING-CH-type profile. 90 156 IPR011016 GO:0008270
Pste6g00024 222 SMART ringv_2 97 150 IPR011016 GO:0008270
Pste6g00024 222 SUPERFAMILY RING/U-box 95 153 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste6g00024 Pste-Chr6 74048 77861 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00024 75 222 C3H Transcription Factor Family AT5G05830 58.389 1.03e-60 187