Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00015 TGCCGAAACATTTTGCGTAACCGTTCTACTGTCTTCTCCCTCTTCGCTTTTCAGTTTTCACTTTCTTTTCGGTTTCTTTTCACTCTTCACTTTACTAATCTCAAACATGGAACCGGAGGAAATCGCCGCCGCAGATGGGAGCGGCGATGAGGGCTTGCTTGGAGCTGATGGCGGCGGAGGCGGCGGTAGGGACAGAGTGAAGGGACCGTGGTCGCCGGAGGAGGACGCCATTCTGAGCCGTCTCGTGAGCAAGTTCGGCGCCAGAAACTGGAGCCTCATCGCGCGCGGAATCAGCGGAAGATCCGGCAAGTCGTGCCGGCTGCGGTGGTGCAACCAGCTCGACCCCGCCGTTAAGCGCAAACCTTTCACCGATGAGGAGGACCGGATCATAGTTGCTGCTCATGCAATCCATGGGAACAAATGGGCAGCCATTGCCAGGCTTCTACCAGGAAGAACAGATAATGCCATTAAGAACCATTGGAATTCCACCTTGAGGCGTCGGGGAGTTGAACTTGATAAGATTAAATTAGAATCTGGTAACTTCATGGAAGATGTTAGCTTGGAGAAAGCAAAAGCATCATCTGAAGACACTCGATCATATGGGAATGCTTCTTTGAAATCCTCCGAAGGGAGAGATGTCAGTTCTATGGAAATCATGGATGACAAATCTGATGACAAAGCACAAACTGAGGCTCAATTACACCATGAAGTTAAGGACCCACCTACCCTTTTCCGGCCAGTAGCACGAGTTAGTGCTTTTAATGTGTATCACTCATTTGATGGTATGCAGCCTTCAACATCTATCCAAAGACCTGTTCCGATGCAAGGGCCCATTCTACAATCACCAAAATCAGATATGGAAGTTTGTAGAATGCTTGAAGGAATTAGTGGTGATCAGTTAGTGCCTCACCAGTGTGGCCATGGTTGCTGTACTGCTCCAAATGGTAGCAAGTCGGAGAGCTCTTTGTTGGGTCCAGAATTCATTGAATTTTCAGAACCTCCATCTTTCCCAAATTTTGAGTTGGCTGCAATAGCTACAGACATTAGCAACCTTGCTTGGCTTAAAAGTGGATTAGAGAGTAGTAGTGTCAAAATGATGGGCAACACTTCTGGTCGGGTAATATCTAATGGATCTCAAGTGCATATTGGCCATTAAAGTGGCAAATAGATCATCATTTCTATTCTGAGAACTGGATATGGGTATGGTAAAAGGCTATAGTGATGACTATCTATTTTCCTTGCAAATGTAATTAGGTAACAAAGTTTCGTGAATCACTGCTATAATGTAAATGGATTCACTAGTTAAAAGTAGAATGTAAGGTTCATGAGTTCAAGGAACAATTATTTTGTTTTTCGGAATCTTGACTTAATTAGGACTGGATTTTGGAACCTGTAACTGGTAACAAATGATAGTTGTTGAATGGGGGAAAATTACTTTGCATTGTA 1446 0.4474 MEPEEIAAADGSGDEGLLGADGGGGGGRDRVKGPWSPEEDAILSRLVSKFGARNWSLIARGISGRSGKSCRLRWCNQLDPAVKRKPFTDEEDRIIVAAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLRRRGVELDKIKLESGNFMEDVSLEKAKASSEDTRSYGNASLKSSEGRDVSSMEIMDDKSDDKAQTEAQLHHEVKDPPTLFRPVARVSAFNVYHSFDGMQPSTSIQRPVPMQGPILQSPKSDMEVCRMLEGISGDQLVPHQCGHGCCTAPNGSKSESSLLGPEFIEFSEPPSFPNFELAAIATDISNLAWLKSGLESSSVKMMGNTSGRVISNGSQVHIGH 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00015 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 133 IPR017930 -
Pste6g00015 349 Pfam Myb-like DNA-binding domain 35 92 - -
Pste6g00015 349 Gene3D - 86 132 - -
Pste6g00015 349 MobiDBLite consensus disorder prediction 154 180 - -
Pste6g00015 349 CDD SANT 86 129 IPR001005 -
Pste6g00015 349 CDD SANT 34 76 IPR001005 -
Pste6g00015 349 ProSiteProfiles Myb-like domain profile. 27 78 IPR001005 -
Pste6g00015 349 SUPERFAMILY Homeodomain-like 29 125 IPR009057 -
Pste6g00015 349 Gene3D - 31 83 - -
Pste6g00015 349 FunFam MYB transcription factor 32 83 - -
Pste6g00015 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 78 IPR017930 -
Pste6g00015 349 PANTHER MYB PROTEIN-RELATED 32 184 - -
Pste6g00015 349 FunFam Transcription factor MYB44 86 132 - -
Pste6g00015 349 ProSiteProfiles Myb-like domain profile. 79 129 IPR001005 -
Pste6g00015 349 SMART sant 83 131 IPR001005 -
Pste6g00015 349 SMART sant 31 80 IPR001005 -
Pste6g00015 349 MobiDBLite consensus disorder prediction 161 176 - -
Pste6g00015 349 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00015 Pste-Chr6 42572 49130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00015 16 349 MYB Transcription Factor Family AT3G09230 52.174 2.19e-112 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste6g00015 Myb_DNA-bind_6 1.2e-15 CL0123