Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03535 TCTGGATTGATTTTGACCCTGACAGCATGAATTGTAGTGATTTATGAGAAGGCGACAGGAGACAGGGGACAGCAAAGACTAATAAATAGCAGTGGATGCACGTACAGTACAGTTGACAGTTGACCTTAGCCAGCTTCTCTTCTCCAAAACAAAACACATTAGCAACAAGCAACTGCCTCTGCCACACCGGCAATGCCCTTGTTGGTTCTCCTGGCCGTGATCGTGGTCGTGGTGGGTGCCAACGACCATGCATCCCACTCCATCATCAAAAGCGCCTGCAGCAGCACCTTGTACCCAGAACTGTGCTTCTCAACCATAGCCTCTGAGAAAGTTTCCAGTCACAAAAATGCGATAGAGAAGTCCTTGAACATAACGATGGGAATCGTTCGGCGGAATTACTTCACCGTGGAGAGGCTCTTAAAAGGAGAATCCCTGAGGCTGAGGCAGAAAACGGCCCTCCACGATTGCCTGGAAACCATTGATGAGAGCCTGGACGAGCTTGGCAAGGCCTTGGACGACCTCCGGGCCTACCCCACTAAAAAGTCTCTCTCTCAGCACGCCGATGATCTCAATACTCTCATCAGTTCCGCCATAACCAACCAAGAGACTTGTCTCGATGGCTTCTCCCATGACCAGGCTGACAAAATACTGAGACACCATCTTGAGGCTGGCCAAGTGCACGTTGAGCACTTGTGCAGCAACGCATTGGCCATGACTAACAACCTCACCCGTACCGACATCTCCAACAGCAAACCCCTCATCCACTCCCCCCATGGTACCCACTGGCCTCACTGGATTTCCGCCGCCGACCGCCACCTTCTTCAGACCGGGACCGTCAATCCCGACGTCGTCGTCGCCCTCGACGGCACCGGGGACTTCACTACGGTCTCGGCTGCTGTGGCCGCCGCTCCTGAGAAGAGTTCCACGAGATATGTTATTAAGATAAAAGCAGGCGTCTATAGAGAGAATGTTGATGTGCCAAAGAAGAAGACCAACATTATGTTCCTTGGGGATGGCAGAACCAACACTATCATCACTGCTAGTAGAAATGTCGTTGATGGCAGCACTACCTTCAACTCTGCCACAGTAGCCATAGTGGGTGAACGATTCTTGGCCAGAGACATAACCTTCGAAAACACAGCTGGTCCCTCGAAGCACCAAGCGGTAGCCCTTCGAGTTGGTGGTGACCTCTCAGCATTCTACATGTGCGACTTCCTTGGATTCCAAGACACTCTTTACGTCCATAGCAATAGGCAATTCTTTGTGAAATGCTACATAGCTGGCACAGTGGACTTCATCTTTGGCAACTCAGCTGCTATCTTACAGGACTGTGACATCCACGCCAGGCGTCCCAATTCGGGTCAAAAGAACATGGTGACTGCACAAGGTCGCGTTGACCCCAACCAGAACACAGGCATTGTGATCCAAAAATGTAGAATTGGTGCCACCAAGGACTTGGAATCCGTAAAAAGGAACTTCCCCACATTTCTCGGGAGGCCATGGAAGGAGTACTCTCGGACTGTCATCATGCAATCAACCATAAGCGATGTTATTCAGCCTGCTGGCTGGCATGAATGGAATGGTAACTTTGCCTTGAATACCTTGTTCTATGGGGAGTATCAGAACAATGGCCCTGGTGCTTCCACCTCAGGGAGGGTTTCTTGGAAAGGATTTAAGGTCATTACCAGTGCTACTCAGGCTCAGCCTTTTACTCCTGCCAATTTCATTTCGGCTTCATCCTGGCTCCCCTCTACAGGATTTCCATTCTCTCTCGGTCTCTAACTTTCTTCTTCCGTTCACCCTTTTTTCAATACCTCAAACTTCCCTTCATCTCACCCCTTTACTTCTATTTCCTATTGGATTGTAATGCCATCTTTTGCATGGAGTAAACCAACTTTTCCACCTACTTATTTAATAAATGAGGTATATTTAAT 1934 0.4933 MPLLVLLAVIVVVVGANDHASHSIIKSACSSTLYPELCFSTIASEKVSSHKNAIEKSLNITMGIVRRNYFTVERLLKGESLRLRQKTALHDCLETIDESLDELGKALDDLRAYPTKKSLSQHADDLNTLISSAITNQETCLDGFSHDQADKILRHHLEAGQVHVEHLCSNALAMTNNLTRTDISNSKPLIHSPHGTHWPHWISAADRHLLQTGTVNPDVVVALDGTGDFTTVSAAVAAAPEKSSTRYVIKIKAGVYRENVDVPKKKTNIMFLGDGRTNTIITASRNVVDGSTTFNSATVAIVGERFLARDITFENTAGPSKHQAVALRVGGDLSAFYMCDFLGFQDTLYVHSNRQFFVKCYIAGTVDFIFGNSAAILQDCDIHARRPNSGQKNMVTAQGRVDPNQNTGIVIQKCRIGATKDLESVKRNFPTFLGRPWKEYSRTVIMQSTISDVIQPAGWHEWNGNFALNTLFYGEYQNNGPGASTSGRVSWKGFKVITSATQAQPFTPANFISASSWLPSTGFPFSLGL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03535 529 Gene3D Invertase/pectin methylesterase inhibitor family protein 20 180 IPR035513 -
Pste5g03535 529 Pfam Plant invertase/pectin methylesterase inhibitor 24 174 IPR006501 GO:0004857
Pste5g03535 529 PANTHER PECTINESTERASE 8 519 - -
Pste5g03535 529 FunFam Pectinesterase 212 529 - -
Pste5g03535 529 CDD PMEI-like_3 27 180 - -
Pste5g03535 529 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 179 IPR035513 -
Pste5g03535 529 Pfam Pectinesterase 218 514 IPR000070 GO:0030599|GO:0042545
Pste5g03535 529 SMART PMEI_2 20 174 IPR006501 GO:0004857
Pste5g03535 529 NCBIfam pectinesterase inhibitor domain 3 179 IPR006501 GO:0004857
Pste5g03535 529 Gene3D - 212 529 IPR012334 -
Pste5g03535 529 FunFam Pectinesterase 21 179 - -
Pste5g03535 529 SUPERFAMILY Pectin lyase-like 214 528 IPR011050 -
Pste5g03535 529 ProSitePatterns Pectinesterase signature 2. 362 371 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03535 Pste-Chr5 29978851 29981372 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03535 20 529 Carbohydrate Esterase AT3G14310 67.347 0.0 736