Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03532 ATGGGAAGTGAGCACGAAGAGGATCTGAAAGATGAGAAGAATCCCCGCCCCCTTGATGAGGATGACATCGCCCTCCTCAAAACCTATGTATTTCCCTCTCTAATTAGGGGTTTGGGGCCTTATTCCACAAGCATTAAAAAAGTAGAGAAGGAAATAAAAGACATGGCCAAAAAAGTCAATGATTTATGTGGCATCAAGGAGTCTGATACTGGTTTGGCTGCACCGAGCCAGTGGGATCTTGTATCTGATAAACAAATGATGCAGGAGGAGCAGCCTCTTCAGGTAGCAAGGTGCACAAAGATCATAAGTCCAAACTCAGAAGATGCCAAATATGTTATCAATGTGAAGCAGATTGCAAAGTTTGTCGTTGGGCTGGGGGACAAAGTTTCACCCACTGACATAGAGGAAGGGATGCGTGTTGGGGTTGATAGAAATAAATATCAGATTCAAATTCCACTGCCTCCAAAAATTGATCCAAGTGTTACCATGATGACAGTTGAAGAAAAACCTGATGTGACATATAATGATGTTGGTGGTTGTAAGGAGCAGATTGAAAAGATGCGAGAAGTTGTTGAGCTTCCCATGCTCCACCCAGAAAAATTCGTTAAGCTAGGAATTGATCCTCCAAAGGGTGTTCTTTGCTATGGTCCACCAGGGACTGGCAAAACACTTTTAGCTAGGGCTGTGGCTAATAGGACTGATGCTTGTTTTATAAGGGTTATAGGAAGTGAGCTAGTTCAGAAATATGTTGGTGAGGGTGCTCGAATGGTTCGTGAGCTATTTCAGATGGCCCGTTCAAAGAAGGCATGCATTGTGTTTTTTGATGAAGTTGATGCAATTGGCGGTGCACGGTTTGATGACGGTGTTGGTGGTGATAATGAGGTTCAACGCACTATGCTTGAAATTGTGAATCAGCTTGATGGGTTTGATGCCCGTGGAAACATCAAAGTCTTGATGGCAACTAACAGGCCTGACACACTAGATCCAGCTTTACTACGGCCCGGACGATTGGACCGTAAAGTTGAATTTGGCCTTCCTGATCTAGAGAGTAGGGCTCAGATATTCAAAATACACACAAGAACCATGAACTGTGAAAGGGATATTCGATTTGAACTTTTAGCTCGGCTTTGTCCAAACTCTACTGGAGCTGATATAAGGAGCGTTTGCACTGAAGCTGGTATGTATGCTATTCGTGCCAGAAGGAAGACTGTAACAGAGAAAGACTTCCTTGATGCAGTTAATAAAGTCATCAAAGGGTATCAGAAGTTCAGTGCAACTCCCAAGTATATGGTCTACAACTGAGTTATCGTTCCTCTACTTCCCAGAAACTATATTAGCGGCACTTTTTAATATTTTTGCCAATAGAAACGCTAGTGCTATATTGCTTTCATTAGCCGTTTGTTTGAATGTTGATTCCAAAATTCTCTAGCGTCTCGTTGCTTTTATTAACACCAGGACTAATTATTTATCAACTTAGACGGAGTAGTGTCTGGTTGAATTTTAAGTAGTTGGGATCTGTTGCTATTGGTGGCCAACAATTAGCGAACACGGTTAGCAATACTAGTAATTCAAAGTTGAGATGTCAATCGGGTATGTACGTAGTTGTGAAGTAGACTTTTGTTAAGTTTCTGTGCTTTTCCGAAACCATCTGAATATAAAGATTTAATGAACTTTCGAGATCATATAAC 1688 0.4159 MGSEHEEDLKDEKNPRPLDEDDIALLKTYVFPSLIRGLGPYSTSIKKVEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRAQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03532 433 Gene3D - 165 344 IPR027417 -
Pste5g03532 433 Pfam AAA+ lid domain 367 410 IPR041569 -
Pste5g03532 433 Gene3D - 40 164 IPR012340 -
Pste5g03532 433 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 10 419 - -
Pste5g03532 433 Pfam ATPase family associated with various cellular activities (AAA) 212 344 IPR003959 GO:0005524|GO:0016887
Pste5g03532 433 ProSitePatterns AAA-protein family signature. 315 333 IPR003960 GO:0005524|GO:0016887
Pste5g03532 433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 423 IPR027417 -
Pste5g03532 433 Gene3D - 346 427 - -
Pste5g03532 433 SMART AAA_5 208 347 IPR003593 GO:0016887
Pste5g03532 433 CDD RecA-like_PAN_like 173 343 - -
Pste5g03532 433 FunFam 26S protease regulatory subunit 7 346 417 - -
Pste5g03532 433 FunFam 26S protease regulatory subunit 7 165 344 - -
Pste5g03532 433 FunFam 26S protease regulatory subunit 7 40 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03532 Pste-Chr5 29919628 29924511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03532 177 398 Calmodulin-binding Proteins AT3G56690 37.220 2.01e-41 155