Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03531 TGAGACACTATGACTGTGATAAAGTAAATAAAATTTCTGTGGCTTTGGATTCTTCTGGCAATTCGTGCTGGCCAGCTTTATTTGGCTATGGGGGCAGCATTAGCATAGACCCATAAAATATTTAGAGAAAAAGATTAGAACTTGGCAAAAAGAGGTGACTGCAAATCCCTTTCAGCTTTCTGGGTAGGAATAATTTTGTGAGATGGTGAAACTTCGAAGGCTGTTGCTGTGTATTACTATCTGCATTCTTTGCTGGATGCCCAATGGTGCCACTGCCGCCACAGATCCAAATGATGCTGCTGCTTTGAGATTGTTGTTTCAAAGTATGAACTCACCATCCCAGCTAGGTTGGCCTGCTAACACTGATGATCCATGTGGACAATCTTGGAAAGGCATTACTTGCTCAGGCAACCGTGTTACGGAGATGTATAGTCCCACTCTCCTCTTATCTTTATATAACTTGATCATGATTACCTTTAGGCCCATTGCTGATTTTATTAAGTTGTCTAATGTTAGACTAACTGGATCGTTGCCATATGGATTACAAGTCATGACCTCTTTGACTGACCTAGACATGAGTAGCAACAGTCTTGGCGGCAGCATACCGTACCAACTTCCTCCATATGTGCAGCGCTTAAATCTTGCTTATAATAACATCACAGGGAATGTCCCTTATTCTATTTCTAATTTGACTGCTCTCGCAAACCTGAATCTTGGTCACAATCAGCTTCAGCAAGGACTGGCTGTTGATTTTCTTAATCTTTCTACCCTCTCCACATTGGATCTCTCTTTCAATTCTTTCACTGGCGACCTCCCTCAGACTATGAGCTCACTCTCAAGCATAACGACCATGTATCTGCAAAACAACCAGTTTACTGGCACTATTGATGTCCTTGCCAATCTGCCTCTGGATAATCTGAATGTGGAAAACAATAATTTTACAGGATGGATACCAGAACAGTTGAAGAACATAAACCTACACATTGGTGGTAATGCATGGAGCTCAGGGCCTGCACCCCCTCCTCCTCCTGGGACTCCTCCAGCACCTAAAAGGAACCAACACCACAAGTCTGATGGTGGAAGCACCACCCCCTCAGATTCTGGCAATGGCAGCAGCAGCTCAGTTGATGAGGGCAAAAAATCTGGTATAGGAGCTGGTGCCATAGCTGGAATTGCAATCTCTGTCATAGTTGTGGGAGCAGTAGTGGCATTCTTTCTGGTGAAGAGAAAAGTCAAGAAGTCATCTTCAGATTTAGAAAAGCTAGACAATCAATCTTTTGCTCCACTTCCTTCAGATGAAGTGCATGAAGAAAAGTCCATCCAAACTTCCTCTGTAACTGAATTGAAGACATTTGATACATCTGCCTCAATAAATCTTAAACCCCCACCTATTGATCGTCATAAATCATTTGATGATGAAGAATTCTCCAAGAAGCCCACAATTGTGAAGAAGACTGTAACAGCTCCTGCAAATGTGAAATCATATTCTATTGCTGAACTGCAGGTTGCTACTGGTAGCTTCAGTGTGGATCAACTTGTTGGTGAGGGTTCTTTTGGGCGTGTGTACCGAGCTCAATTTGATGATGGACAGGTTCTAGCAGTGAAGAAGATAGATTCATCTGTCCTTCCCAATGATCTGTCAGATGATTTTATAGAAATAATTTCCAACATCTCCATTTTACATCATCCAAATGTAACAGAACTTGTAGGTTATTGCTCTGAGTATGGACAACACCTCTTGGTCTACGAGTTCCATAAAAATGGATCACTGCATGACTTCCTTCACCTATCAGATGAATATAGTAAACCATTGATATGGAATTCCCGTGTCAAGATTGCTTTGGGGACTGCACGTGCTCTAGAGTACCTACATGAAGTTAGTTCACCATCAGTTGTTCATAAGAATATTAAATCAGCCAACATATTGCTTGATGCAGAGCTTAATCCTCATCTTTCGGATAGTGGATTGGCAAGTTATATTCCAAATGCAGACCAGATATTGAACCATAATGTTGGATCTGGGTATGACGCACCAGAAGTTGCCTTGTCTGGTCAGTATACTTTGAAAAGTGATGTCTACAGCTTTGGAGTAGTCATGTTGGAACTTCTCAGCGGACGTAAACCATTTGATAGTTCAAGGGCAAGATCTGAACAGTCATTGGTTCGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCGGCACTGAAAGGGCTATATCCTGTAAAGTCTCTTTCTCGATTTGCCGATGTTATTGCCCTTTGCGTTCAGCCGGAGCCAGAATTTCGACCACCGATGTCTGAAGTGGTTCAAGCACTGGTGCGGTTAGTGCAGCGAGCTAACATGAGTAAACGAACATTTAGTAGTAGTGATCATGGAGGATCCCAACGAGGGAGTGATGAGCCAGCTCTACGGGATATCTAAATCCTTGTATGGAAAAATGTATTTATATTTTTCTCTTTTTGACCACTTTAGGAGTTACATTGATTGGCTGACCAAGTTAAACACTGGGTGATGTATGTTGTTCAAGCTGGCTCCGTTATTTGTAATATAATTTCCAGTAGTTGCAAATTTGAAGCTCAGTTTAGATTGACGAGTGCCATACTCTGTTGATAACTTTCTAAACGTGTCCATAACAGCTTATTATGCGAATGTAGATGAGTACAACGGTGAAATAACTTTCTTCTGAGACACTGTTGCTATTAGTGGTTACTAATACGAATGATAGATGAAATCGGTGCAATAAAAATTGATACAGTATAGGACTGCACCAACTACCAAC 2801 0.4163 MVKLRRLLLCITICILCWMPNGATAATDPNDAAALRLLFQSMNSPSQLGWPANTDDPCGQSWKGITCSGNRVTEMYSPTLLLSLYNLIMITFRPIADFIKLSNVRLTGSLPYGLQVMTSLTDLDMSSNSLGGSIPYQLPPYVQRLNLAYNNITGNVPYSISNLTALANLNLGHNQLQQGLAVDFLNLSTLSTLDLSFNSFTGDLPQTMSSLSSITTMYLQNNQFTGTIDVLANLPLDNLNVENNNFTGWIPEQLKNINLHIGGNAWSSGPAPPPPPGTPPAPKRNQHHKSDGGSTTPSDSGNGSSSSVDEGKKSGIGAGAIAGIAISVIVVGAVVAFFLVKRKVKKSSSDLEKLDNQSFAPLPSDEVHEEKSIQTSSVTELKTFDTSASINLKPPPIDRHKSFDDEEFSKKPTIVKKTVTAPANVKSYSIAELQVATGSFSVDQLVGEGSFGRVYRAQFDDGQVLAVKKIDSSVLPNDLSDDFIEIISNISILHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVSSPSVVHKNIKSANILLDAELNPHLSDSGLASYIPNADQILNHNVGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRARSEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFSSSDHGGSQRGSDEPALRDI 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03531 746 Gene3D Transferase(Phosphotransferase) domain 1 519 734 - -
Pste5g03531 746 MobiDBLite consensus disorder prediction 261 311 - -
Pste5g03531 746 ProSitePatterns Protein kinases ATP-binding region signature. 446 469 IPR017441 GO:0005524
Pste5g03531 746 ProSiteProfiles Protein kinase domain profile. 440 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03531 746 SUPERFAMILY Protein kinase-like (PK-like) 422 712 IPR011009 -
Pste5g03531 746 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 99 713 - -
Pste5g03531 746 MobiDBLite consensus disorder prediction 291 311 - -
Pste5g03531 746 Gene3D Ribonuclease Inhibitor 30 203 IPR032675 -
Pste5g03531 746 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Pste5g03531 746 Pfam Protein tyrosine and serine/threonine kinase 442 712 IPR001245 GO:0004672|GO:0006468
Pste5g03531 746 Gene3D Ribonuclease Inhibitor 204 268 IPR032675 -
Pste5g03531 746 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 518 726 - -
Pste5g03531 746 SUPERFAMILY L domain-like 26 268 - -
Pste5g03531 746 MobiDBLite consensus disorder prediction 724 746 - -
Pste5g03531 746 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 404 517 - -
Pste5g03531 746 MobiDBLite consensus disorder prediction 268 282 - -
Pste5g03531 746 Gene3D Phosphorylase Kinase; domain 1 402 517 - -
Pste5g03531 746 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 90 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03531 Pste-Chr5 29911549 29919555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03531 11 725 Strubbelig Receptor Gene Family AT1G53730 64.560 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pste5g03531 PK_Tyr_Ser-Thr 9.2e-41 CL0016