Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03530 GGCACTTCCACTTTCCTCCAAATACATATAACATGTCTCAGGAACTGGATAAGCCTTTGCTTCATCCTCATAATTTCAACCGAGAGGGCATTGATTTGGAGCGTATACCATTAGAAGAAGTATTTGAACTGTTGAGAACGTCTCGAAGAGGACTTACATCCGACGATGCTGACGCCCGAATAGAGATATTTGGTCCAAACAAACTTGAAGAGAATAAAGAGAATAAAATATTGAAATTTCTTAGTTTTATGTGGAATCCTCTGTCATGGGTTATGGAAGCAGCAGCACTGATGGCGATTATCCTTGCTAATGGCGGAGGCGAAGGTCCTGATTGGCAAGACTTTACAGGAATTATATGCCTATTGGTAATAAACTCAACAATTAGTTTTATAGAAGAAAATAACGCAGGTAATGCTGCAGCAGCACTAATGGCTCGTTTAGCTCCTAAAACAAAGGTTCTAAGAGATGGGCAGTGGCAAGAGGAAGATGCAGCTATTTTAGTACCTGGAGATATAATTAGCATAAAGCTGGGAGATATAATTCCAGCTGATGCTCGCTTGCTAGAAGGGGATCCTCTAAAAATTGATCAGTCAGCCCTTACCGGAGAATCTCTACCTGTCACAAAGACAACTGGTGACGAGGTCTTTTCAGGTTCAACATGCAAACATGGAGAGATTGAAGCTGTAGTTATTGCAACAGGAGTTCACTCATTTTTCGGAAAGGCAGCATACCTGGTTGACAGTACCCAAGTTGTTGGACATTTTCAGAAGGTCCTTACCTCAATTGGTAACTTCTGCATTTGCTCTATAGCTGTAGGGATGATTTTTGAAATAATTATAATGTTCCCAGTGGAGCATCGATCATACAGGGATGGAATCAACAACCTTCTTGTTCTCCTAATTGGAGGAATACCCATCGCTATGCCAACAGTATTATCTGTAACACTTGCAATTGGCTCACATCGTCTTTCTCAGCAGGGAGCTATCACAAAAAGAATGACAGCAATTGAAGAAATGGCAGGCATGGATGTCCTATGCAGTGACAAAACTGGAACTCTTACACTGAATCGCCTAACTGTTGATCGAAACCTTATTGAGGTCTTCAACAGAAATATGGACAAGGATACCGTAGTTCTACTAGCAGCTAGAGCATCTAGACTGGAAAACCAGGACGCCATTGATACTGCCGTAGTTAATATGCTAGCTGATCCAAAGGAGGTAGATATCCATGTTACTTTGATACTGAAGCTCTCCAAATATAAACGTACAGCAATAACATACATTGACTCTGATGGCAATTTTCATAGAGCCAGTAAAGGAGCTCCGGAACAGATTCTAGAGTTGTGTCAAGAGAAAGACCACATTGCCAAAAAGCTGCACAGTATAATAGACAAATTTGCTGAGAGGGGATTGCGATCTCTTGCAGTTGCTTATCAGGAGGTTCCTGAAAAATCCAAGGATAGCCCCGGAGGTCCTTGGACTTTTTGTGGTTTGTTGCCTTTGTTTGATCCACCGAGACATGATAGTGCTGAGACCATCCGAAGAGCACTTAATCTTGGCGTCTGTGTTAAGATGATCACAGGTGATCAATTAGCGATTGCAAAGGAGACTGGCCGAAGACTTGGCATGGGAACAAACATGTACCCTTCTTCATCTTTGTTGGGTCGAGAAAAAGATGAACATGAAGCTCTTCCTGTAGACGAGCTCGTAGAAATGGCAGATGGCTTTGCTGGTGTATATCCGGAACACAAGTATGAAATAGTGAAAATTTTACAAGAAAAGCAGCATGTTGTTGGAATGACTGGGGATGGGGTAAATGATGCCCCAGCATTGAAGAAAGCAGATATTGGAATTGCTGTCTCAGATGCTACAGATGCTGCAAGAAATGCTGCTGATCTGGTTTTAACTGAGCCTGGGTTAAGTGTGATTATTAGTGCTGTGTTAACTAGCAGAGCTATATTCCAAAGAATGAAAAATTATACAATATATGCCGTTTCCATCACCATAAGGATAGTGCTTGGTTTTTCTCTCCTAGCATTGATTTGGGAGTATGATTTTCCACCCTTCATGGTCCTGATCATTACAATACTAAATGATGGTACAATCATGACCATATCTAAAGACAGGGTGAAGCCATCTCCGACACCTGACAGTTGGAAGCTGCCTGAGATATTCGCAACAGGAATCGTCATTGGCACTTATCTTGCTTTGGTTACTGTTCTGTTCTACTGGGCAATCGTTGAGACCACTCTCTTTGAGACCCACTTCCAGGTAACCTCCTTATCCGGCGACAGTGAGAAAGTTTCATCAGCCGTATATCTACAAGTCAGCATCATTAGCCAGGCTCTAATTTTTGTTACTCGAAGCCGTGGTTGGTCATTTCTAGAGAGACCCGGTGCTCTACTGATGTGCGCCTTTGTAATAGCTCAACTGGTGGCCACCTTAATTGCTGTATATGCATATATAAGTTTTGCTAAAATTAGCGGAATTGGATGGCGATGGGCTGGTGTTATATGGTTATACAGTTTAATCTTCTATGTGCCATTGGACATCATTAAGTTCACAGTGCGGTATGCCTTGAGTGGAGAAGCCTGGAAGCTCCTATTCGAGAGAAAGACTGCTTTTACATCAAAGAAAGACTATGGAAAAGAAGATAGGGCTGCAAAGTGGGTTCTTTCTCAGAGGAGTTTGCAAGGACTGCATCTGATGACGGAGGTAAATGGAAGGCAGTCTTCTTTCATAGCTCAACAGGCCAGACGACGTGCTGAAATAGCCAGGCTTGGGGAGTTGCACACTCTCAGAGGACATGTTGAGTCTGTTGTCAGACTCAAAAATTTAGACCGGAAGAATCTCATCCAATCAGCTCATACAGTCTAATCACAACGACATTCAACTAATTATGCCATTTTTGTTGCTTTATTTTATTCAACACTATTACCACCTGAGATTTACATTCATAATTTTTGTTCTTCACACTTTTGGGTTATGGACTAATAAAGTAGCGTGCAATATGTTTT 3016 0.4184 MSQELDKPLLHPHNFNREGIDLERIPLEEVFELLRTSRRGLTSDDADARIEIFGPNKLEENKENKILKFLSFMWNPLSWVMEAAALMAIILANGGGEGPDWQDFTGIICLLVINSTISFIEENNAGNAAAALMARLAPKTKVLRDGQWQEEDAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKTTGDEVFSGSTCKHGEIEAVVIATGVHSFFGKAAYLVDSTQVVGHFQKVLTSIGNFCICSIAVGMIFEIIIMFPVEHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDTVVLLAARASRLENQDAIDTAVVNMLADPKEVDIHVTLILKLSKYKRTAITYIDSDGNFHRASKGAPEQILELCQEKDHIAKKLHSIIDKFAERGLRSLAVAYQEVPEKSKDSPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGREKDEHEALPVDELVEMADGFAGVYPEHKYEIVKILQEKQHVVGMTGDGVNDAPALKKADIGIAVSDATDAARNAADLVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFSLLALIWEYDFPPFMVLIITILNDGTIMTISKDRVKPSPTPDSWKLPEIFATGIVIGTYLALVTVLFYWAIVETTLFETHFQVTSLSGDSEKVSSAVYLQVSIISQALIFVTRSRGWSFLERPGALLMCAFVIAQLVATLIAVYAYISFAKISGIGWRWAGVIWLYSLIFYVPLDIIKFTVRYALSGEAWKLLFERKTAFTSKKDYGKEDRAAKWVLSQRSLQGLHLMTEVNGRQSSFIAQQARRRAEIARLGELHTLRGHVESVVRLKNLDRKNLIQSAHTV 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03530 947 CDD P-type_ATPase_H 40 843 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pste5g03530 947 Gene3D - 347 491 IPR023299 GO:0000166
Pste5g03530 947 PRINTS P-type cation-transporting ATPase superfamily signature 590 609 - -
Pste5g03530 947 PRINTS P-type cation-transporting ATPase superfamily signature 486 497 - -
Pste5g03530 947 PRINTS P-type cation-transporting ATPase superfamily signature 613 625 - -
Pste5g03530 947 PRINTS P-type cation-transporting ATPase superfamily signature 508 518 - -
Pste5g03530 947 PRINTS P-type cation-transporting ATPase superfamily signature 335 349 - -
Pste5g03530 947 PRINTS P-type cation-transporting ATPase superfamily signature 185 199 - -
Pste5g03530 947 SMART Cation_ATPase_N_a_2 21 93 IPR004014 -
Pste5g03530 947 Gene3D - 332 627 IPR023214 -
Pste5g03530 947 SUPERFAMILY HAD-like 331 637 IPR036412 -
Pste5g03530 947 PANTHER CALCIUM-TRANSPORTING ATPASE 24 884 - -
Pste5g03530 947 FunFam ATPase 4 plasma membrane-type 581 817 - -
Pste5g03530 947 SUPERFAMILY Calcium ATPase, transmembrane domain M 21 849 IPR023298 -
Pste5g03530 947 SUPERFAMILY Calcium ATPase, transduction domain A 138 234 IPR008250 -
Pste5g03530 947 FunFam Plasma membrane ATPase 484 638 - -
Pste5g03530 947 Gene3D - 898 947 - -
Pste5g03530 947 Pfam E1-E2 ATPase 136 314 - -
Pste5g03530 947 Pfam haloacid dehalogenase-like hydrolase 331 604 - -
Pste5g03530 947 Gene3D - 138 222 - -
Pste5g03530 947 Pfam Cation transporter/ATPase, N-terminus 25 87 IPR004014 -
Pste5g03530 947 FunFam Plasma membrane ATPase 138 222 - -
Pste5g03530 947 NCBIfam HAD-IC family P-type ATPase 107 355 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste5g03530 947 NCBIfam HAD-IC family P-type ATPase 565 670 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste5g03530 947 SFLD p-type atpase 317 641 IPR044492 -
Pste5g03530 947 Gene3D - 100 817 - -
Pste5g03530 947 FunFam Membrane H(+)-ATPase1 431 491 - -
Pste5g03530 947 NCBIfam plasma-membrane proton-efflux P-type ATPase 40 808 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pste5g03530 947 PRINTS H+-transporting ATPase (proton pump) signature 762 783 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste5g03530 947 PRINTS H+-transporting ATPase (proton pump) signature 562 578 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste5g03530 947 PRINTS H+-transporting ATPase (proton pump) signature 621 646 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste5g03530 947 PRINTS H+-transporting ATPase (proton pump) signature 590 606 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste5g03530 947 PRINTS H+-transporting ATPase (proton pump) signature 448 466 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste5g03530 947 ProSitePatterns E1-E2 ATPases phosphorylation site. 337 343 IPR018303 -
Pste5g03530 947 SFLD Haloacid Dehalogenase 317 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03530 Pste-Chr5 29859033 29872097 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03530 1 947 Primary Pumps ATPases AT1G17260 78.676 0.0 1491