Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03523 ATGGCTCGCATTCTTGGATGCTGTATTGAATCTGGCATCACTCTAGTAGTTTATGAGTACCCTTCCAATGGTACTCTGCAGGAACATTTACATCAAAGCAAAGGACAACATGTTCGTTTAGATTGGTGTAGGAGATTGACTATTGCTGCAGAAACAGCTAGTATTCTTGCGTTCTTACACTACGAGAACAATCCTCCCGTATTACATCATAACCTTAAATCTGCCTGCATCTTCCTAGATGATGGTTTTTCCGTCAAGATTGCAGGATTTGGTCTGATCAACTCCAAATTTTTCTATGGTTCTCACTTACAGAAGAACTATGAAGGCTTTGGCATCTGCAAAAATGATGTTTACGACATGGGAGTGTTGCTTCTTGAGCTTATATCAGGTTCAAACCACTTGGATTCACCAACTTTAGCCTTACAGGAAATAAAGGCTGGGAAATTTGAAGAAATTTTTGATCCATTTCTTTGCTATCATGAACAACCACATTGTCGCCAAGAGCAAATGCAAGCAATTGCTGATCTTGCTACAAGATGCCTGTTATTTGGTGTAGATGGAAGGCTAGGAATGATTGATGTTGTGAGGGAGTTAGTACACATGACTAAAGAAAGCCTCGAAGGAGGAATTGCGAAAGGCCCTGCACTGGAGGAGACATTCTCAAATTCAAGTCTTCTTCAGATGATATCAATGTCTCCTGATTCAATGAATGTCCCCTGA 720 0.4056 MARILGCCIESGITLVVYEYPSNGTLQEHLHQSKGQHVRLDWCRRLTIAAETASILAFLHYENNPPVLHHNLKSACIFLDDGFSVKIAGFGLINSKFFYGSHLQKNYEGFGICKNDVYDMGVLLLELISGSNHLDSPTLALQEIKAGKFEEIFDPFLCYHEQPHCRQEQMQAIADLATRCLLFGVDGRLGMIDVVRELVHMTKESLEGGIAKGPALEETFSNSSLLQMISMSPDSMNVP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03523 239 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 3 202 IPR045274 GO:0007166
Pste5g03523 239 FunFam Putative WAK-related receptor-like protein kinase family protein 22 211 - -
Pste5g03523 239 Gene3D Transferase(Phosphotransferase) domain 1 1 207 - -
Pste5g03523 239 SUPERFAMILY Protein kinase-like (PK-like) 3 198 IPR011009 -
Pste5g03523 239 Pfam Protein tyrosine and serine/threonine kinase 3 96 IPR001245 GO:0004672|GO:0006468
Pste5g03523 239 ProSiteProfiles Protein kinase domain profile. 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03523 Pste-Chr5 29376970 29377689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03523 1 198 Receptor kinase-like Gene Family AT2G23450 38.182 7.45e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pste5g03523 PK_Tyr_Ser-Thr 6.3e-11 CL0016