Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03511 ATGGCCGACAAGATTGCCACCTTGTTGAAAACGGCAAAGGTTCAAGTAGATTCTTATTGGCCCGCCTTGTTTGCTAAACTTGCGGAGAAGAAAAATATTGGCGATTTGATTGCGAATGCTGCTGGTGGTGGGGCACCAGTTGGTGTTGCAGCTGCCCCAGTTGCTGTTGCAGGTGGTGGTGGTGCTGCAGCCGCTGCCCCTGCTGCTGAGGAGAAAAAGAAGGAAGAACCTGAAGAAGAGAGTGATGATGATATGGGATTTAGCTTGTTCGATTAGGGCTTGTCAAATCCGATTTGGTTAAATTTTGTGGTACCTTTAAGGTTTCTTTATGGATATTGTAGTTTTGTTTTTGTGCTGGATATTTATATTTGTATACGATTTGATTTTGTAGTGTTATAAACTTTGGAATGGAGGGTTTATGTCCATTTGAGAATTTGGATGGCAGATAGGTTTACTCTATATTTGGTTTCTTCGTTTAATTTGTCGCTCACCTGTTCTTCTGTTGTCTCCCATTGCTATGTCTTGATATGGTTGTTGCATCGAATTGTGATAGGCAATTCTGATGTGAAATTACCAGCTGACG 583 0.4185 MADKIATLLKTAKVQVDSYWPALFAKLAEKKNIGDLIANAAGGGAPVGVAAAPVAVAGGGGAAAAAPAAEEKKKEEPEEESDDDMGFSLFD 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03511 91 Hamap 50S ribosomal protein L12 [rpl12]. 2 91 IPR027534 GO:0003735|GO:0005840|GO:0006414
Pste5g03511 91 MobiDBLite consensus disorder prediction 65 91 - -
Pste5g03511 91 CDD Ribosomal_P1 1 39 - -
Pste5g03511 91 Pfam 60s Acidic ribosomal protein 2 90 - -
Pste5g03511 91 MobiDBLite consensus disorder prediction 76 91 - -
Pste5g03511 91 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 2 91 - -
Pste5g03511 91 FunFam 60S acidic ribosomal protein P2 1 41 - -
Pste5g03511 91 Gene3D - 1 40 IPR038716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03511 Pste-Chr5 29229406 29230176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03511 2 91 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 47.778 1.86e-22 82.0