Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03501 TCGGACTGCGAAAGAAAGAGAGAGGCAACGCTAACGTGCAGTCGAGTCCAGAGCATTTTCAGTATTACACAGAATTTGACGGTGACAGAATATCGATGTTCAGGTCGCACAACATATGGATCGACACTACACCCTGTTTGCAAGGACAAGCTAATTGACGTGATGATGGGATCGAGCGTAATAACGATATCCAACAACTACTTCTCACACCACAACGACGTGATGCTCTTGGGGCACAACAATCACTATCTTCTGGACTCAGGATGTAGGTCCCAGGGGCGCAATATGTTGAATGAGACATTTTTTGTGGTTTCTGGAGCTATTGTCGAACCTAATTATCACAACGCCTACAGTGTTGAACCTGAGAATGTCGACCGTATCTCCTTTCTCACTATGTTTGCCGGTGTTCTCGACGTTGCT 420 0.4595 SDCERKREATLTCSRVQSIFSITQNLTVTEYRCSGRTTYGSTLHPVCKDKLIDVMMGSSVITISNNYFSHHNDVMLLGHNNHYLLDSGCRSQGRNMLNETFFVVSGAIVEPNYHNAYSVEPENVDRISFLTMFAGVLDVA 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03501 140 SUPERFAMILY Pectin lyase-like 36 86 IPR011050 -
Pste5g03501 140 Pfam Pectate lyase 30 81 IPR002022 -
Pste5g03501 140 Gene3D - 20 96 IPR012334 -
Pste5g03501 140 PANTHER PECTATE LYASE 18-RELATED 46 88 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03501 Pste-Chr5 29044266 29045656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03501 47 90 Polysaccharide Lyase AT3G53190 70.455 9.65e-16 70.9