Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03500 GTTATGGCCAGCAAAACAAAGATTTACATTGTTCTGGAGTTTGTAGATGGAGGAGAATTATTTGACAAAATAGCTGCATATGGGAGACTTAAAGAAGATGAAGCGAGAAATTATTTCCAACAACTTATTAACGCTGTTGACTACTGCCATAGTAGAGGCGTGTATCACAGAGATTTGAAGCCTGAGAATATGCTTCTGGACTCGAATAGTGTTCTTAAAGTTTCTGATTTTGGATTGAGTACGTACTCACAGAAAGAGGGTGAACTGCTCCGCACTGCATGTGGAACCCCAAATTATGTTGCTCCTGAGGTTCTTAATGATAGAGGTTATGTTGGTTCTACATCTGATATCTGGTCTTGCGGAGTCATTCTCTTCGTGCTTATGGCTGGGTACTTGCCTTTTGACGAGCCCAGTCACATGACTCTGTACAGGAAAATTGGTAGGGCACAATTCTCTTGTCCATCATGGTTCACGCCACAGGCAAAGGCACTGCTGAAACGCATTCTTCATCCAAACCCTCTAACGAGGATAAAAATTCATGAGCTCTTAGAAGATGCATGGTTCAAGAAAGGATACAAGCCAGCATCCTTCACTGAGGAAGAGGACCTAAGTGTAGATGATGTAGCCGTTGCTTTCAGTCATTCTAATGAAAAGCTAGTGACACTGAGAAAAGAGAAACCCGTCTCCATGAATGCTTTTGAGCTCATTTCTAGGTCACAAAGTTTCAATCTAGATAGTTTGTTTGAGAAGCAAACGATGAATCTGCAAGGTGACAAGAGCGGGAGGAAGGGTTACCTTTCAGTGGCTACTCAGGTTTTTGAAGTGGCTCCCTCCGTGCACATGGTGGAGCTGGGAAAGACAGCGGTTTTACAAAATCTTCTCGTCAGGGTTGCAAGAAATAGTGTGGAATACTAAAGGGAAAAACTTGAAGAATTAAGGTATCACCTTCTTATATTTTCCCTGCTATATATGGTATATATATCCACGAAATTAGTTAATAAGATCACTTCTGCAATGATTCGTTTCATTAATTCGTAACACTGTTTCTAGTGCCTTTTCCTAGATGCACTTCATGGAAATGGGAAGGTACGGTGCTTTGTTAAATCTAAAACTATAAATGTGTCCACTTGATGTTCGATATGAGATAGAAACATAAATAGAGCCCACAAGGTTCAAGGATATTGTTTGTTCATCTTTGATGGTTGTACTTTTAAAAGGCTGTTATAAATGTGAAGGAACATAGTACAAAGTGAG 1254 0.4027 VMASKTKIYIVLEFVDGGELFDKIAAYGRLKEDEARNYFQQLINAVDYCHSRGVYHRDLKPENMLLDSNSVLKVSDFGLSTYSQKEGELLRTACGTPNYVAPEVLNDRGYVGSTSDIWSCGVILFVLMAGYLPFDEPSHMTLYRKIGRAQFSCPSWFTPQAKALLKRILHPNPLTRIKIHELLEDAWFKKGYKPASFTEEEDLSVDDVAVAFSHSNEKLVTLRKEKPVSMNAFELISRSQSFNLDSLFEKQTMNLQGDKSGRKGYLSVATQVFEVAPSVHMVELGKTAVLQNLLVRVARNSVEY 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03500 304 Gene3D Transferase(Phosphotransferase) domain 1 1 250 - -
Pste5g03500 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 54 66 IPR008271 GO:0004672|GO:0006468
Pste5g03500 304 Pfam NAF domain 227 251 IPR004041 GO:0007165
Pste5g03500 304 FunFam Non-specific serine/threonine protein kinase 15 195 - -
Pste5g03500 304 ProSiteProfiles Protein kinase domain profile. 1 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03500 304 Pfam Protein kinase domain 2 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03500 304 Gene3D Kinase associated domain 1, KA1 251 294 - -
Pste5g03500 304 SMART serkin_6 1 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03500 304 SUPERFAMILY Protein kinase-like (PK-like) 4 216 IPR011009 -
Pste5g03500 304 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 1 287 - -
Pste5g03500 304 ProSiteProfiles NAF domain profile. 225 249 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03500 Pste-Chr5 28980200 28984171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03500 1 288 CBL-interacting serine-threonine protein kinases AT1G01140 65.152 5.24e-154 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pste5g03500 Pkinase 2.4e-52 CL0016