Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03488 AAATCTCTTGATTTTGAGGAAGTTATAGAGAAAGATCCCACTAGTCGATATCGTCGGTACAATGAAATATTGGGCAAGGGTGCTTTCAAGACTGTTTATAAGGGCTTTGATGAAGTTGATGGAATAGAAGTTGCTTGGAACCAAGTTCAAATTGATGAACTCCTACAATCAGTAGATGATCTAGCAAAGTTGAATTCTGAAGTTAATCTATTGAAGTCTTTAAAGCATGAAAACATCATAAAGTTCTTTAATTCTTGGATTGATGATAAGAACAAAACCATTAACATTATTACTGAGTTATTCACATCTGGAAACTTAAGACAATACCGCAAGAGACATAGATATGTTGACATGAAAGCCATTAAAGGTTGGGCTAGACAAATACTTCGTGGCCTAGTATACCTTCATAGTCATAATCCACCTATTATCCATAGAGACTTGAAATGTGACAACATTTTTGTGAATGGAAACCACGGAGAAGTTAAGATAGGAGACCTTGGTTTAGCAATTGTCATGCAACAACCAACTGCTCGAAGTGTTATTGGGACTCCTGAATTTATGGCTCCAGAACTGTACGAAGAAGAATACAATGAACTTGTTGATGTTTATTCTTTTGGGATGTGTTTATTGGAGATGGTAACTTTTGAGTACCCATATAGTGAATGCAAGAATCCTGCCCAAATTTATAAGAAAGTAACCTCTGGCATTGAACCCGCATCACTTAAAAGGGTGAGTGATCTCCAAATTAAGGAGTTTATTAAGAAATGTCTTGTTCCAGCATCTGAAAGATTGTCTGCAAAGGAGCTTTTGAAAGACACATTTTTGCAAGTTGAGAGTTCAAAACAATCAATCATTGATCCTTTATATTTACCTAATAAATCCTTGAAAGTTATAGACCTTTCCGAGTTTGCTAAGCTAACCATGGACCTAGATGTTGACTACCAACACATATCTTTGAGTACTTGCGTTGAGGAAAACAACCAAGAAAGTCCACATTGTCCGGTTCTTGAAGTCCAAAGGACATATAAAAATAATGAGTTTAGGTTGAAAGGAACCAAAAATGAAGATAACTCTGTATCACTGATCTTGCGCATTGCTGATTTATGTGGTGGAGTCAGGAATATACATTTTCTTTTTTACCTTGAGACAGATACCGCAATCTCCGTTGCCTCAGAAATGGTTGAAAACTTGGAGTTGGAAAATAATGATGTAGTTTTCATTGCTGAACTTATTGATTATTTGATAATGCAACTTGTATCGGGGTGGAAACCCTCATTTGATTATTCCTCAAATGGAAGATTAAGTCAATCTGGCGGTTCTCCAACATTTGTAGATAACCAAACGATAATATCATGCCCGTGGATTCCCGCCCTTGCTAGTGTTCCATCTGAATTTCTTTTGGATCAAGATCATAGCTTTGGGGTTAATAATACTCAAAGAGAAAGTTTAGCAGCAAATCCAAAGAGCAACATGTTTAATGTTGTTGAAAAGGATATTGTTAGGGGAAAACATAATTCTTCTTCTACTTTGTCTAGCTTGGAAGATCGACATTCAAAAGAATCCACAGCTTCTAATATAGTTATTGAAGATACCTGCATGAAAAATGATAATTATCTTGATTTTGATGCTGATATGAGCTTTAAAGGATTAAGTTGTTCCACCTCTGAAATGGAGCTTGGAGATATATATTTTGAAGGCTATAAATTACATACTACAAGTTGCAATGCTAGAGAAAGTATTGTGATAAATGAATTCTCAAAGAACTCACTTCCTTTAACTCCAACTTTTTCTGAAACATCAAATATTATGAGTTTGACAAGCAGCTGTTCCTCTTTATCTTTAACTGACAAAGACATTGACCTTGAACTAAAGTTTGAATATGATGCAATTGAGTCACAATATCAACATTGGTTTCAAGAACTTTTGAGATTGAAGTTGGAGGCAATGGAAGCTGCAAAAAAGAAATGGATAGCTAAGAACAAAATTGTTGTTCATTGA 1998 0.3519 KSLDFEEVIEKDPTSRYRRYNEILGKGAFKTVYKGFDEVDGIEVAWNQVQIDELLQSVDDLAKLNSEVNLLKSLKHENIIKFFNSWIDDKNKTINIITELFTSGNLRQYRKRHRYVDMKAIKGWARQILRGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDVYSFGMCLLEMVTFEYPYSECKNPAQIYKKVTSGIEPASLKRVSDLQIKEFIKKCLVPASERLSAKELLKDTFLQVESSKQSIIDPLYLPNKSLKVIDLSEFAKLTMDLDVDYQHISLSTCVEENNQESPHCPVLEVQRTYKNNEFRLKGTKNEDNSVSLILRIADLCGGVRNIHFLFYLETDTAISVASEMVENLELENNDVVFIAELIDYLIMQLVSGWKPSFDYSSNGRLSQSGGSPTFVDNQTIISCPWIPALASVPSEFLLDQDHSFGVNNTQRESLAANPKSNMFNVVEKDIVRGKHNSSSTLSSLEDRHSKESTASNIVIEDTCMKNDNYLDFDADMSFKGLSCSTSEMELGDIYFEGYKLHTTSCNARESIVINEFSKNSLPLTPTFSETSNIMSLTSSCSSLSLTDKDIDLELKFEYDAIESQYQHWFQELLRLKLEAMEAAKKKWIAKNKIVVH 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03488 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Pste5g03488 665 Gene3D - 357 437 - -
Pste5g03488 665 FunFam Probable serine/threonine-protein kinase WNK1 3 99 - -
Pste5g03488 665 SUPERFAMILY Protein kinase-like (PK-like) 14 276 IPR011009 -
Pste5g03488 665 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 644 - -
Pste5g03488 665 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 361 415 IPR024678 GO:0004674|GO:0005524
Pste5g03488 665 Gene3D Transferase(Phosphotransferase) domain 1 101 282 - -
Pste5g03488 665 Gene3D Phosphorylase Kinase; domain 1 4 99 - -
Pste5g03488 665 CDD STKc_WNK 16 275 - -
Pste5g03488 665 Pfam Protein kinase domain 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03488 665 FunFam probable serine/threonine-protein kinase WNK9 101 280 - -
Pste5g03488 665 SMART serkin_6 18 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03488 665 ProSiteProfiles Protein kinase domain profile. 18 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03488 Pste-Chr5 28596959 28600401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03488 604 665 MAP Kinase Kinase Kinase AT5G41990 45.161 1.88e-08 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pste5g03488 Pkinase 3.3e-51 CL0016