Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03473 GTCACAACCCTTTTCCTCTCTCAGTATATGCACTTGGAAAATAAAAGCATTAAACTCTGCGAAAACAAGAACAAGAAACTAGGCGAGTTGGGTTTGTTTTAGAGGGAACATATGACCATTAAGATAAGGAACTACACTTTAGTATTTTATTTGGTTTAGCTTTGCTTGTGAAGTCGGCTTTGTTTTCTGCAATTCTCACTCCACAAAGCCACACCCTTCATCGCACCCCAAAAACTAACAGAAAAACAAAAAAGAAAAAAGAAAAAGGAAACAAAAAATTAAAACAACTTAACATACTATTATTAAAATTGTTGTAATTATTGTTACAGTTTTCATTTCTCTTGTCCCTTTATTTTTCGATCGGATCTGAGGCTCTTCAGAGGTGCAGAAAGGCACACCAAAGTTGCTTCACTTTCTTGAAGTGTGGTTTCTCTTAGTTCTAAGCACACACACTTATGCACATATTCAACTTGTGGAATCCATAGCCATGGAAGAAAGTTTCTTGCTCGGCAATTTCATTGCCATTTTTATGGTTTGATCAGTTGGATTTTGCAGCTCTTCAAGGATTTCTTAATGGGGTCACATGTTAATGGAGTTGATTCTTTATCAGAGGTTCAGAGTTCAGTTTCTGTGGTAGATCATGATCCTCCTTCGACATCCGGGATTCCCCGGCCTTCTTCTCGGCCTCCATTAGGAGCATCTAGAAATTATGTGGCTTCTTCCAGTCAGCATAACCATGGAATGAAGACCATCCACAATCAAAAGCATTCCCATCAGGAGGCTGGCAATGTGGAGCGCGACGGAGTGCCCAATATGGAGAAGCGGTTTTATGATGCTAATGGCAAATCTGAGTATGTGAGCCTCAATAAAGCTGTTGAAAGTTGTTTAGGAAAGAATATCTCCACAATGGAAACAAAATTAAGCATCAAGCAACCATTAGAGACTTCCAAGAATTATGATTCTAGTTGCATATTGAAATCTGACAATTGCAAATTAGGTTCATCAAAAGGAGTTGATGATCAAACAAAGAGTTACTGTCAATCAGAGATTACTTTTTGTCCAAGTCCTCAGAATAGTTTCTATTCAGAAGCCAAGGAAAGTTTTGCCAATACTGGAGCCAGTGAATGTGTTAGTGTTGATAAGTCAGTTGAAAGTGGAGAAGTTACTAATTCTTGTGAATTTAATGAGAGCAGGAAGACCAGCATATGTAGAGGGAGTACTGGAAGTGATGTTAGCGACGAGAGCAGCACCAGTAGTTTTAGCAGTGCTTTGTATAAACCCCACAAGGCAAATGATATAAGATGGGAAGCAATTCAAGCAATTCGAGCCCGTGATGGGGCATTGGAAATGAGACATTTCAGGTTGTTGAAGAAATTGGGATGTGGAGACATAGGATGTGTGTATCTAGCCGAGTTAAGTGGCACAAGAACTTGTTTTGCCATGAAAGTAATGAACAAAACCGAACTGGCAAGTCGCAAGAAGCTTGTTAGGTCACAGACAGAGAGAGAGATACTGCAGTCTCTAGATCATCCATTTCTACCCACATTATATACACACTTCGAGACAGAGACATTCTCCTGCTTGGTTATGGAGTTTTGCCCTGGTGGGGATTTGCATGCACTCAGGCAAAGACAACCTGGGAAGTATTTTTCTGAGATTGCTGCCAGGTTTTATGTGGCAGAAGTTCTCCTTGCCTTGGAGTACTTGCACATGCTTGGGGTCATCTACAGAGACCTTAAGCCAGAAAATGTGTTGGTTAGAGAAGATGGTCATATAATGCTTTCAGATTTTGATCTCTCTCTAAGGTGTGCTGTCAGTCCAACTCTGGTGAAGTCATCAAACTCTAGCTTGGAGACTAAAAGCTCAGGATACTGTATTCAACCTGCCTGCATTGAACCAACTTGTGTAATACAGCCAGATTGCATTCAACCATCATGCTTCACACCGCGATTTCTCTCTGGCAAATCCAAGAAAGAAAAAAAGTCTAAACCAAAGAATGATGTTCAAAATCAGGTGACCCCTCTCCCTGAGCTTATTGCGGAGCCGACAAATGCTCGATCAATGTCATTCGTGGGGACACACGAGTACCTGGCACCGGAAATTATCAAAGGCGAAGGCCATGGCAGTGCAGTAGATTGGTGGACATTTGGAATATTCTTATACGAGCTCTTGTTTGGTAGAACACCGTTCAAAGGCTCGGCGAACCGAGCAACCTTATTCAATGTTGTTGGCCAGCCTTTGAAATTTCCAGAATCCCCAACTGTCAGCTTTGCTGCCAGGGACTTGATCAGAGGTTTGCTTGTGAAAGAGCCTCAGAATCGCCTTGCATACAGACGCGGAGCCACAGAAATAAAACAACATCCATTCTTTCATAATGTTAACTGGGCACTGATCAGATGTGCAAATCCTCCAGAAGTTCCAAGACAGGCCATGAAAGTACTTGCAGTTGAAAAGGTGCCTGGAGTGAAGCCTTCTGGTAACTATTTAGATATTGATTTCTTTTGATCTTAATGTCTGTTTTCTCCTTTGAACTAATTTCCATATTTTATTTGTGTTGTTTGTTCATGCTTCTTTCCTTTGTATAAAATGCTGCAACTCTCTTGTCTACATTGATCAATGCTTGTAATTGTCCATGATAAACTGCTGTCAGAAACTCCAAAATGCATCAAATTGAGGAACAAACTTCTG 2688 0.4081 MGSHVNGVDSLSEVQSSVSVVDHDPPSTSGIPRPSSRPPLGASRNYVASSSQHNHGMKTIHNQKHSHQEAGNVERDGVPNMEKRFYDANGKSEYVSLNKAVESCLGKNISTMETKLSIKQPLETSKNYDSSCILKSDNCKLGSSKGVDDQTKSYCQSEITFCPSPQNSFYSEAKESFANTGASECVSVDKSVESGEVTNSCEFNESRKTSICRGSTGSDVSDESSTSSFSSALYKPHKANDIRWEAIQAIRARDGALEMRHFRLLKKLGCGDIGCVYLAELSGTRTCFAMKVMNKTELASRKKLVRSQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKYFSEIAARFYVAEVLLALEYLHMLGVIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNSSLETKSSGYCIQPACIEPTCVIQPDCIQPSCFTPRFLSGKSKKEKKSKPKNDVQNQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLKFPESPTVSFAARDLIRGLLVKEPQNRLAYRRGATEIKQHPFFHNVNWALIRCANPPEVPRQAMKVLAVEKVPGVKPSGNYLDIDFF 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03473 643 MobiDBLite consensus disorder prediction 1 53 - -
Pste5g03473 643 CDD STKc_phototropin_like 260 619 - -
Pste5g03473 643 PANTHER FLIPPASE KINASE 1-RELATED 98 621 - -
Pste5g03473 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 383 395 IPR008271 GO:0004672|GO:0006468
Pste5g03473 643 ProSiteProfiles Protein kinase domain profile. 262 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03473 643 Gene3D Transferase(Phosphotransferase) domain 1 346 413 - -
Pste5g03473 643 Gene3D Transferase(Phosphotransferase) domain 1 493 617 - -
Pste5g03473 643 Pfam Protein kinase domain 496 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03473 643 Pfam Protein kinase domain 263 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03473 643 MobiDBLite consensus disorder prediction 1 24 - -
Pste5g03473 643 SUPERFAMILY Protein kinase-like (PK-like) 240 619 IPR011009 -
Pste5g03473 643 SMART serkin_6 262 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03473 643 Gene3D Phosphorylase Kinase; domain 1 260 345 - -
Pste5g03473 643 FunFam Serine/threonine-protein kinase D6PK-like 260 345 - -
Pste5g03473 643 FunFam serine/threonine-protein kinase D6PK-like 346 413 - -
Pste5g03473 643 FunFam serine/threonine-protein kinase D6PK-like 494 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03473 Pste-Chr5 28183917 28188629 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03473 166 643 AGC Kinase Gene Family AT5G47750 70.766 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pste5g03473 Pkinase 1e-36 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03473 5 28183917 28188629 Pste5g03473 5 28183917 28188629 ECH