Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03452 ATGGAGATGGAGAAGAACAGGAGCAGAAGGATGTACAACCTGTTCGTGAAGGAGTTGGACGGGAAAACCCTAACCCTTCAATTCCCCTATCCGATCCTCTACGCGAGTTCGATCAAGGATCGGCTCTTCCAACTCACCGGAATCCCCGCGCAGCACCAGCGCCTGGTCACCGGCTTCCGTCACCTCAACGACGACAAATCTGCGATCCAATGCTCCCCAGAGGACGGCAACATGTTCCCGTCGGTGCGGCTGCTGCTGCGCCTGAAGGGCGGCAAGGGCGGGTTCGGGTCGCTGCTCCGTGGCGCCGCCACAAAGGCCGGGCAGAAGAAGACCAACAATTTCGACGCCTGCCGCGACATGAGTGGGCGGAGGCTGAGGCACGTCAACGCGGAGAAGAGGTTGGAGGAGTGGAAGGCCGGGGAAGAGGAGAGGAGGCTCGAGAAGGTGGCTGAAGAGTTTCTTAAGAAGCAGATGAAGAAGGGTAAAGGTAAAGGTAAGGGTAAGGGTGAAGGTGATGCTGAAGCCCACAAATATGTCGCCAAATACCGTGAGGAATCAGAACGTTGCGTTGCCGAGGTTGCCTTGATGGGGAAGAGGAAACTGAATGAAAGTGATAGTGATTATAGTGATGATTCCGATGAAGAGGAGATGGAGAAATCGGACTTGTTGAATGACCAGAATGAATCGGGCTCAAATAAGGCTGAGAGTAGTTTGGGTTCGGTAACTGGGGCCATAGGCTCTTCTGGTACTGGCTCTTGTGAAAGTGGGTCTGAAGAAGAGAAGGAAACTGTTGTAGAAGGAAATGTTGGATTACTAAGTGGTGAAACCGTTCAGGCTGTGCCTGAAACTGTGCTGAGTGACGAGGCTACTGCAATGCCAAAGGAGTCCGTGGTTGCTGGACTTAATGCTGAAGATAATGGATGTCAGGATTGCGATGGAGCTGTGTCTGACCAGTTTGATGGTGCTGTGAATCAAGCCTCAAGTATTTCGGTCTCCGAAGCTGTGGCCACTGATGGCAAATCTAATGATATGGATATTGATGATTCTATTGAGCATAAAGCAGCAGTCAATAAAGAAAGCCCGCCAAGCACTAGTGTTCCTGCAGTGGGGGGCCCCCTGAATTTAGATGCCTTTAATTCAGCAGAACAACTAGAGGTTCTTGGCTTGGAAAGGTTGAAGTCGGAACTACAGTCACGTGGGTTAAAATGCGGAGGTACTTTGCAGGAACGTGCTGCCAGGCTTTTTCTTTTAAAATCGACTGCTCTGGATAAACTTCCAAAGAAGCTGCTTGCAAAGAAGTGA 1302 0.51 MEMEKNRSRRMYNLFVKELDGKTLTLQFPYPILYASSIKDRLFQLTGIPAQHQRLVTGFRHLNDDKSAIQCSPEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWKAGEEERRLEKVAEEFLKKQMKKGKGKGKGKGEGDAEAHKYVAKYREESERCVAEVALMGKRKLNESDSDYSDDSDEEEMEKSDLLNDQNESGSNKAESSLGSVTGAIGSSGTGSCESGSEEEKETVVEGNVGLLSGETVQAVPETVLSDEATAMPKESVVAGLNAEDNGCQDCDGAVSDQFDGAVNQASSISVSEAVATDGKSNDMDIDDSIEHKAAVNKESPPSTSVPAVGGPLNLDAFNSAEQLEVLGLERLKSELQSRGLKCGGTLQERAARLFLLKSTALDKLPKKLLAKK 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03452 433 Pfam Replication stress response SDE2 C-terminal 363 432 IPR025086 -
Pste5g03452 433 MobiDBLite consensus disorder prediction 224 254 - -
Pste5g03452 433 SUPERFAMILY Ubiquitin-like 8 91 IPR029071 -
Pste5g03452 433 Pfam Silencing defective 2 N-terminal ubiquitin domain 12 159 IPR024974 -
Pste5g03452 433 PANTHER SPLICING FACTOR SF3A-RELATED 13 432 - -
Pste5g03452 433 MobiDBLite consensus disorder prediction 201 274 - -
Pste5g03452 433 MobiDBLite consensus disorder prediction 207 221 - -
Pste5g03452 433 Gene3D - 4 93 - -
Pste5g03452 433 CDD Ubl_ubiquitin_like 14 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03452 Pste-Chr5 27964605 27968961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03452 366 432 C2H2 Transcription Factor Family AT5G06160 46.269 1.92e-10 60.8