Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03442 TTCATCTTCACAAAATGGAAGTTGGCACCAAGAGGAAACACACTAGTGTAATCCATCAGCTAATCCAAGGAAAGGAGCTGGCAAATTCTTCTTCTCCATCATCCCATGAAACCAATGTATTGTTGGTTGCCAAAATACTTTTGTCCTATGAGAAAGCACTCACCATGCTGAACTGGGGCTCTATTCTGGGAGAGGCCAAGATCACCATGATGGATTCCCATTGTTCTTTTACTAATGGTGGGACCCCCATAAGTGAGGTCCTACACCATGAATTTGACCACAAACCTGTCTTCAAGAAAAGAATGACCACGCCCAGATGGACCCAACAGGTCAAGCTTTGCTCAAGAACAGGACTTGAGGCGTCTTTTGATGATGGATATAGCTGGAGAAAATATGGGCAAAAGGATATTCTTGGAGCTATGTTTCCAAGAGGATATTATAGATGCACACATAGAAATGTACAAGGGTGTCTGGCAACAAAACAAGTTCAAAGGTCAGATGAAGACCCAACAACCATTGAGGTGACCTACAGAGGAAGACATATATGCACGCAAGCTAAGCATTTAAACAAGGCATACCCATCAAACATAAAGATGGGTTTGGGGGAAAATCGATTCCACAATGATAAAAAGAATCAACCACTTTCAGAGAAAATACGACAACAAACCCCAGACGGGATTTTCACCTTTGAAACAGAGCTTCAACTCAAAACTGAGGAATTGGAAACCAAGGAGGATATCTTCGCATGGTTTCCTTTCCTTCTCCATCAAAACGAGGACAAAAGCAGCATGTTACCTGAGACTGAGACCATTATTGAAAACCATTTGACGAAAGTTTTTCTCCAGTATTCATATTACCAGCGACTTCAGAATCAAACCCTTTCTAACATACAAACCTCTGAATCTGATACCACTGAGATAGTTTCAGCCCCAACTTCAGTCACCAACTCCCCAATCCTGGATTTGGAAAGCATGCTTTATAAAGGGGATTTTGACACAGATTTCCCTTTCAACACCCCTGAATTTTTCTCTTCACAAGAACTTCCCTACAGTACCACAGTCAAAACAAGTTGTTCGAGCGATCCATCTGTTCATCATAGTCTAATTCCGTCAAGC 1115 0.4179 MEVGTKRKHTSVIHQLIQGKELANSSSPSSHETNVLLVAKILLSYEKALTMLNWGSILGEAKITMMDSHCSFTNGGTPISEVLHHEFDHKPVFKKRMTTPRWTQQVKLCSRTGLEASFDDGYSWRKYGQKDILGAMFPRGYYRCTHRNVQGCLATKQVQRSDEDPTTIEVTYRGRHICTQAKHLNKAYPSNIKMGLGENRFHNDKKNQPLSEKIRQQTPDGIFTFETELQLKTEELETKEDIFAWFPFLLHQNEDKSSMLPETETIIENHLTKVFLQYSYYQRLQNQTLSNIQTSESDTTEIVSAPTSVTNSPILDLESMLYKGDFDTDFPFNTPEFFSSQELPYSTTVKTSCSSDPSVHHSLIPSS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03442 367 SUPERFAMILY WRKY DNA-binding domain 117 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste5g03442 367 ProSiteProfiles WRKY domain profile. 113 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g03442 367 Pfam WRKY DNA -binding domain 119 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g03442 367 SMART WRKY_cls 118 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g03442 367 FunFam WRKY transcription factor 53 104 181 - -
Pste5g03442 367 Gene3D WRKY domain 101 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste5g03442 367 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 10 265 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03442 Pste-Chr5 27856973 27860083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03442 16 189 WRKY Transcription Factor Family AT5G24110 44.633 5.17e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste5g03442 WRKY 5.3e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03442 5 27856973 27860083 Pste6g01840 6 8444922 8448444 PCT