Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03415 ACATGCCGGAGATTAAGCATGATGCGGATGGATTTCAAGATGATTCCTTGAGGATAATGAAGGAGATACAGAGAGTCAATCCTAGCTGTCAGGTTCTTCTGTTTTCTGCTACATTTAATGACATTGTCAAGAATTTTGTTTCAAGGACTGTCAAGAGGGATCATAATCAACTTTTTGTAAAGAAAGAAGAACTATCTTTAGATGCAGTGAAGCAATATAAAGTGCATTGTCCTCATGAACTTGCTAAGATTGAAGTAATAAAAGATTACATATTTGAAATAGGAAAGAATTGCAAAATATTGCATAAATCACTTGTTGATTTGGGCTATGAGGTTACATCTATACAAGGTGCTCTCAATCATGAAGAGAGAGACAAAGTTGTCAAGGAGTTCAGAGATGGTTTGACTCAAGTCCTTATATCAACTGATCTTCTTGCTCGTGGCTTCGATCAGCAGCAGGTTACTTTGGTCATCAATTATGATCTTCCAAAGAAACACAATCTACCTGAGCCCGATTATGAAGTGTATTTGCACAGGGTTGGCAGAGCTGGGCGTTTTGGTCGCAAGGGGGCTGTATTTAACCTGATATGTACTGAAGAGGATGGAAGGCTCATGTCGAAGATTGAGAGCCATTTTGGCACTCATGTAGCTGAGGTGCGAGCACAAAATGTTGAAGACTACAAATCTGCTCTCAAGGAGGCCGATTTTGGCCACATATCTCTGAATGCTTTAATTATTCTACACGGACACCATGCGGATAATTGTTTAGGTTTTGGGGATGGAGAGTTCTTGTTCAGTCTGTTTTTAATGCTGCTGCTATGGTTGATTACACCTCTCATTATATTAGCTTTG 851 0.3948 MPEIKHDADGFQDDSLRIMKEIQRVNPSCQVLLFSATFNDIVKNFVSRTVKRDHNQLFVKKEELSLDAVKQYKVHCPHELAKIEVIKDYIFEIGKNCKILHKSLVDLGYEVTSIQGALNHEERDKVVKEFRDGLTQVLISTDLLARGFDQQQVTLVINYDLPKKHNLPEPDYEVYLHRVGRAGRFGRKGAVFNLICTEEDGRLMSKIESHFGTHVAEVRAQNVEDYKSALKEADFGHISLNALIILHGHHADNCLGFGDGEFLFSLFLMLLLWLITPLIILAL 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03415 283 SMART helicmild6 98 186 IPR001650 -
Pste5g03415 283 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 68 227 IPR001650 -
Pste5g03415 283 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 9 207 - -
Pste5g03415 283 Pfam Helicase conserved C-terminal domain 95 186 IPR001650 -
Pste5g03415 283 Gene3D - 61 234 IPR027417 -
Pste5g03415 283 CDD SF2_C_DEAD 69 195 - -
Pste5g03415 283 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 201 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03415 Pste-Chr5 27521403 27523446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03415 10 225 Eukaryotic Initiation Factors Gene Family AT1G72730 36.364 2.96e-34 126