Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03404 ATACGACACGTGTGTCCTGACGTGGACTTCGCCCTCGCGCTCCTTCTTCTTCACCACCACCATCTTCCATCTTTCATCTTTTAGACACACAAAATAAATCTCCACTTAATTGCTCCTTCCATGTCTCAACCTTCTTCTTTTTAGGATACTTCATCTTCCACCACTACTCTTCCTTTCTTCTTTTAGCCCAATTCGCTATCTGCTCAGTTGAGACATTTTTCAAGTAGTAGCAAAGCTCATACCATATTTGACTTAGTGTTTTCCGATTGGAGCTTATAATGGGAAACAATGAGGAAGAGAAATCTACTAAGACTGAAAAGCCTTCTTCACCTGTAACATTGGATCCGGCCAATCAGACCAACCAGACGAATATTCATGTCTATCCTGATTGGGCTGCTATGCAGGCATATTATGGGCCAAGAGTCACCATGCCACCATACTACAACTCAGCTGTGGCTTCTGGACATGCTCCTCACCCGTACATGTGGGGGCCACCACAGGCAGTACCTATGATGCCACCTTATGGGCCTCCTTATGCTGCAATTTATCCACATGGAGGGGTTTTCCCTGCAGTTCCTATTGGGCCACATACACATAGTCAAGGAGTTCCGTCTTCTCCTGCTGCTGGGACTCCTTTAAGCATAGAGACACCTCCCAAATCATCTGTAAATACTGATCAGGGTTTAATGAAGAAATTGAAAGAGTTTGATGGACTTGCAATGTCAATAGGCAATGGCCATGTTGAAAGTGCAGATCGTGGAGGTGAAAATAGGCTGTCACAGAGTGTGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACTTCAGGGGCTAATCAAACAAGAAGGAAAAGAAGCTGTGAGGGAACACCAACCACTGATGGAGAAGGGAAAAGAGAGATCCAAGGCAGTCCCATTTCTAAAGAGACTGCAGCTTCTAATAAGATCATAGTCATGCCTGCCAGTATTGCAGGAACAATAGCTGGACCTGTAGTTTCTTCAGGTTTGACCACTGCACTGGAGCTGACAAATCCTTCCAGTGTTCATTCTAAAATAAATACCCCAAGTGCCCTACAACCTTGTTCAGTATTGCCTGCTGAAGCATGGTTACAGAATGAGCGTGAGCTGAAACGTGAGAGGCGAAAACAATCAAATCGAGAATCTGCTAGAAGGTCCAGATTAAGGAAGCAGGCTGAAACTGAAGAACTGGCACGAAAAGTTGAGTCGTTGAATGCTGAGAATGCAACGCTGAAATCAGAAATTAATCGACTGACTGAAAGTACATATGCATTTCATTCTGATGCTTCATATTATTTTTTGACTCAGGAAAAACTTAAAAATGCTCCACTGGGACAAACACAAGAGATAACTTTGAACATAATTGAAAGCCAGAGGGCTACACCCGTAAGTACAGAAAACTTACTATCAAGAGTTAATAATAATTCCAGTTCTAATGATAGAACTGCGGAAGAAGAGAATGGTTTTTGTGAAAATAAACCAAATTCTGGTGCAAAGCTGCATCAACTACTGGACACAAGTCCTAGAGCTGATGCTGTGGCAGCTGGTTGA 1571 0.4335 MGNNEEEKSTKTEKPSSPVTLDPANQTNQTNIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHAPHPYMWGPPQAVPMMPPYGPPYAAIYPHGGVFPAVPIGPHTHSQGVPSSPAAGTPLSIETPPKSSVNTDQGLMKKLKEFDGLAMSIGNGHVESADRGGENRLSQSVDTEGSSDGSDGNTSGANQTRRKRSCEGTPTTDGEGKREIQGSPISKETAASNKIIVMPASIAGTIAGPVVSSGLTTALELTNPSSVHSKINTPSALQPCSVLPAEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNAENATLKSEINRLTESTYAFHSDASYYFLTQEKLKNAPLGQTQEITLNIIESQRATPVSTENLLSRVNNNSSSNDRTAEEENGFCENKPNSGAKLHQLLDTSPRADAVAAG 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03404 430 Coils Coil 301 335 - -
Pste5g03404 430 Coils Coil 274 294 - -
Pste5g03404 430 CDD bZIP_plant_GBF1 286 334 IPR045314 GO:0003700|GO:0006355
Pste5g03404 430 SMART brlzneu 281 345 IPR004827 GO:0003700|GO:0006355
Pste5g03404 430 Pfam G-box binding protein MFMR 1 98 IPR012900 -
Pste5g03404 430 MobiDBLite consensus disorder prediction 152 216 - -
Pste5g03404 430 SUPERFAMILY Leucine zipper domain 284 338 IPR046347 GO:0003700|GO:0006355
Pste5g03404 430 Gene3D - 284 337 - -
Pste5g03404 430 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 283 335 IPR004827 GO:0003700|GO:0006355
Pste5g03404 430 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 340 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pste5g03404 430 MobiDBLite consensus disorder prediction 14 28 - -
Pste5g03404 430 MobiDBLite consensus disorder prediction 384 430 - -
Pste5g03404 430 MobiDBLite consensus disorder prediction 106 132 - -
Pste5g03404 430 MobiDBLite consensus disorder prediction 283 306 - -
Pste5g03404 430 MobiDBLite consensus disorder prediction 162 194 - -
Pste5g03404 430 Pfam Disordered region downstream of MFMR 133 259 - -
Pste5g03404 430 Pfam bZIP transcription factor 281 337 IPR004827 GO:0003700|GO:0006355
Pste5g03404 430 MobiDBLite consensus disorder prediction 1 28 - -
Pste5g03404 430 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 288 303 IPR004827 GO:0003700|GO:0006355
Pste5g03404 430 FunFam G-box binding factor 3 284 338 - -
Pste5g03404 430 MobiDBLite consensus disorder prediction 105 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03404 Pste-Chr5 27437414 27443261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03404 1 430 bZIP Transcription Factor Family AT2G46270 49.199 1.91e-111 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste5g03404 MFMR_assoc 9.6e-21 No_clan