Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03400 ATGCCGAAGAACAAGGGAAAGGGAGGAAAGAACAGGAAGAGGGGAAAGAACGAAGCGGACGACGAGAAGAGAGAGCTGGTGTTCAAGGAGGACGGGCAGGAGTACGCGCAGGTGCTACGGATGCTGGGGAACGGTCGATGCGAAGCCATGTGCATCGACGGCACAAAGCGTCTCTGTCACATCCGTGGCAAGATGCACAAGAAGGTCTGGATCGCCGCCGGTGACATCATCCTCGTCGGCCTCCGTGACTACCAGGATGACAAGGCTGACGTCATCCTCAAGTACATGCCCGACGAGGCCCGCCTCCTCAAGGCCTACGGCGAGTTGCCCGACACCACTCGCCTCAACGAGGGCATCGGCGCCGGCTTGGACGAGGAGGACGACGCCACCGCCAACGATTACATCGAGTTCGAGGACGAGGATATTGATAAGATCTGA 438 0.589 MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDTTRLNEGIGAGLDEEDDATANDYIEFEDEDIDKI 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03400 145 FunFam Eukaryotic translation initiation factor 1A 2 145 - -
Pste5g03400 145 CDD S1_IF1A 33 109 IPR001253 GO:0003743|GO:0006413
Pste5g03400 145 ProSiteProfiles S1 domain IF1 type profile. 22 96 IPR006196 GO:0003723|GO:0003743|GO:0006413
Pste5g03400 145 Pfam Translation initiation factor 1A / IF-1 32 93 IPR006196 GO:0003723|GO:0003743|GO:0006413
Pste5g03400 145 Hamap Translation initiation factor 1A [eif1a]. 16 110 IPR001253 GO:0003743|GO:0006413
Pste5g03400 145 Gene3D - 2 145 IPR012340 -
Pste5g03400 145 NCBIfam translation initiation factor eIF-1A 14 110 IPR001253 GO:0003743|GO:0006413
Pste5g03400 145 PANTHER EIF-1A 1 145 IPR001253 GO:0003743|GO:0006413
Pste5g03400 145 MobiDBLite consensus disorder prediction 1 25 - -
Pste5g03400 145 ProSitePatterns Eukaryotic initiation factor 1A signature. 41 63 IPR018104 GO:0003743|GO:0006413
Pste5g03400 145 SUPERFAMILY Nucleic acid-binding proteins 2 144 IPR012340 -
Pste5g03400 145 SMART eIF1neu4 28 110 IPR001253 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03400 Pste-Chr5 27399551 27399988 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03400 1 145 Eukaryotic Initiation Factors Gene Family AT2G04520 88.276 3.61e-89 254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03400 5 27399551 27399988 Pste6g01914 6 8841588 8842025 PCT