Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03393 GTTGCTTTTATTCTTGTTTCTCTTATTCTGTTTACTCTGCTACTCATTCATTGCTTTCTGAGACCCTTTTATTCTGAGTTGTTGGTTTCTTGGTGAGTAGTTGTGAAAATATTGGAACTTGGGTTTGGGGATGGGTGCCAACATGAGCTTTTGTTTTTCAAATCCATAGGTCAAAGCTCTCACCTTTGGGTTTTTTAAGCCAAGGTTTATGAGTTTTCCTTGTGGGGCAGATAAGGGTATGCTCTTTTTGTTATGTGTGAGTGATTCTGCTAGTTGCTATATTAGTTAGTTTAACATCTTGAGGGGAAGTAGAATGGGATCTGGCAATGAGGTTCATTCAGTTGTGGAGTTTAATTTGGATGCCAAGTGGCTGATAGATCCCAAGCAACTATTTGTTGGGCCTAAAATTGGGGAAGGTGCTCATGCCAAAGTGTATGAAGGAAAATATAAAAATCAGAATGTTGCTGTTAAGATTATTAATAAGGGTGAAACCCCAGAACAGATTTCTAGGAGAGAGGCTCGGTTTGGCAGAGAGATTGCCATGTTATCTAGAGTTCAACACAAAAATCTAGTTAAGTTTATTGGGGCCTGCAAAGAACCAGTTATGGTTATAGTAACCGAACTTCTCTTAGGTGGAACATTACGCAAATATTTGTGGAGTATTCGACCAAAGTGTTTGGATATGCCTGTAGCAGTTGGATTTGCTCTTGATATTGCAAGAGCAATGGAATGCTTACACTCTCATGGGATCATTCACCGTGACCTTAAGCCTGATAACTTGATCTTGACAGCAGATTATAAAACAGTTAAACTTGCTGATTTTGGTCTTGCCAGAGAAGAGTCATTAACAGAGATGATGACAGCCGAGACAGGGACATACCGTTGGATGGCTCCAGAACTTTACAGCACTGTCACTCTAAGACAAGGGGAGAAGAAGCATTACAACCATAAGGTGGATGCCTATAGCTTTGCAATAGTGTTGTGGGAGCTCATCCATAATAGGTTGCCGTTTGAAGGCATGTCTAATCTACAGGCAGCATATGCAGCTGCATTTAAGAATACAAGGCCAAGTGCTGAAGACCTTCCTGAAGATTTGGCTCTAATTGTGACCTCTTGTTGGAAAGAGGATCCAAATGATAGACCAAATTTTAGTCAAATAATACAGATGCTGCTGCAATATCTAATCACCATTTCACCGGCTGAGCCAGTTGTTCCGATGCGAATCACATCCAAGAATGCGGTATTGCCACCGGAATCTCCAGGTACAAGTGCTTTAATGGCTGGAAGAGATGATTCTGGAGAAACCCCAAAAGGCAACATTGAAGGCAGTTCTAAAGGGTCTTTCTTCTGCTGTTACTGATGACACAATGCACTCACATAATTTTTTCATTGGGGCTGTTCCAGATAACAGTATGGCAACCTGAATAAACCCCATTCACAAAATGTTACAACTAGAATCTTAACAAGAAAGGTTTTACCAAATAATTCAGTTTAGTTTTTATGTTCTCAGCAATAGTAGTAGCATGCCATGTTCTTTTAACATCGGATTGACTTTACTTCTAACAGATTAGGGTTGAGGTTGCTGAGATGTATTGTTGTATAATATGGTTCATCCAAAGGCCTTCACCTCCTGCTTAATGTATGGAAATGACTTGGATAATAAATGAAAATGGGGGAAGATGTTTATCTCTGCATTAATGTGATCCTCTTGTGAAACTTTGTAACCTTTACAATTTTTCATGCATCTATGATTTTGCCAATTTTGATGCTTC 1772 0.3956 MGSGNEVHSVVEFNLDAKWLIDPKQLFVGPKIGEGAHAKVYEGKYKNQNVAVKIINKGETPEQISRREARFGREIAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLWSIRPKCLDMPVAVGFALDIARAMECLHSHGIIHRDLKPDNLILTADYKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELIHNRLPFEGMSNLQAAYAAAFKNTRPSAEDLPEDLALIVTSCWKEDPNDRPNFSQIIQMLLQYLITISPAEPVVPMRITSKNAVLPPESPGTSALMAGRDDSGETPKGNIEGSSKGSFFCCY 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03393 348 SMART serkin_6 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03393 348 Gene3D Phosphorylase Kinase; domain 1 14 105 - -
Pste5g03393 348 FunFam serine/threonine-protein kinase HT1 107 307 - -
Pste5g03393 348 Pfam Protein tyrosine and serine/threonine kinase 29 286 IPR001245 GO:0004672|GO:0006468
Pste5g03393 348 FunFam Kinase suppressor of Ras 1 15 105 - -
Pste5g03393 348 PRINTS Tyrosine kinase catalytic domain signature 102 115 IPR001245 GO:0004672|GO:0006468
Pste5g03393 348 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672|GO:0006468
Pste5g03393 348 PRINTS Tyrosine kinase catalytic domain signature 140 158 IPR001245 GO:0004672|GO:0006468
Pste5g03393 348 PRINTS Tyrosine kinase catalytic domain signature 214 236 IPR001245 GO:0004672|GO:0006468
Pste5g03393 348 CDD STKc_MAP3K-like 32 286 - -
Pste5g03393 348 Gene3D Transferase(Phosphotransferase) domain 1 107 298 - -
Pste5g03393 348 MobiDBLite consensus disorder prediction 312 337 - -
Pste5g03393 348 ProSiteProfiles Protein kinase domain profile. 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03393 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Pste5g03393 348 SUPERFAMILY Protein kinase-like (PK-like) 17 309 IPR011009 -
Pste5g03393 348 ProSitePatterns Protein kinases ATP-binding region signature. 32 53 IPR017441 GO:0005524
Pste5g03393 348 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 20 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03393 Pste-Chr5 27314704 27318630 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03393 1 347 MAP Kinase Kinase Kinase AT3G27560 75.843 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pste5g03393 PK_Tyr_Ser-Thr 1.3e-56 CL0016