Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03388 ACGCTTAGAAGAATGAATTGTTTTCCGTGTTTTTCAAAGAGTAAGAAAAGCAATAGCAAGAGGGAGCAGCAAGTTCAAACACCACAGGAAAACGTTATAACAACAAGAACACCGCCGGAGGTAAAGAAACAGAAGGCAGATGATCCAAACCAAGTAGATACTTCAAATATTCAAGCACAAAATTTCACATTCCGTGAGCTGGCAATTGCGACAAAGAATTTCCGCCAAGAATGTTTGTTGGGTGAAGGGGGCTTTGGCAGAGTTTATAAGGGAACAATTCCTGCAACTGGGCAGGTGGTAGCAGTGAAGCAACTCGACCGTAATGGGGTGCAAGGAAGTAAGGAATTTCTGGCTGAGGTTTCAATGCTAAGTCTCCTGAGCCATGACAATCTGATCAAACTCATTGGTTATTGTGCTGATGGAGATCAACGTCTTTTGGTGTATGAGTTCATGCCTGCTGGATCTTTAGAATCCCGTCTTCTTGAGAGGAAACCAGATGAACCTCCATTGGATTGGTACAACAGAATGAAAATAGCATCAAATGCAGCTAAAGGACTATGGTACTTGCACGACAAGGCCAGTCCTTCAGTTATATATCGGGACTTGAAATCCGCAAACATCTTGCTGGATAATGATTTCAACGCAAAATTATCGGATTATGGTCTGGCCAAACTTGCTGGTAAAGATAAGATGAACATTGTGCCCACAAGAGTTATGGGTACCTATGGTTACAGTGCTCCAGAGTATGTAAGAACAGGTAACCTCACCTTGAAATCAGATGTCTACAGTTTTGGAGTTATCTTGCTAGAGCTCATTACTGGACGGCGTGCTATTGACACCACAAAACCGCACGATGAGCAAAATCTAGTTTCATGGGCACAACCCATATTCAGGGACCCAAAAAGATATCCAGACATGGCAGATCCAAATCTGCATAAAAAATTCCCAGAAAAGGATCTCAACCAAGTTGTTGCAATTGCAGCCATGTGCTTACAGGAGGAAGCAGCGGCGCGTCCTTTGATGAGTGATGTTGTAACTGCTCTCAGTTTTCTTTCCACCACTCCTCCAAAGGATGATCCTGAAAAGAGTGCTGCGACTGAAAGTGAAGCAGGGTCTGGGAAGGACAGCGATAGCTCATCCGATGAAGAGAGTTCTTGTGACGAGGACAACGGAACTGCTCAGAATGAGAGCAAGGAGTTGTACTCCAAATCAAGCCACAAGAGCAGCGGCAGATCAAAGAATGGAACTGCTTCTTCTAGCCACAGGAGCAGCTCCACTTTAGATTCAGAAAATGAAAGCGTGTCAGCCAGCAACCAAAGTAGTAGGAAAAGTAGCAAAAAAAGCAAGAAAGGTTCCTTAGGGCAGAAGAGTAGTAAGAGCAGCAAAAAATCTGCTGCCAAAGTGTCAAACCACAAGAATGGAAGCCGTTCCTCCAATTCAAGTGGCAGCAGCAACAATGGTGATTTTTTTATGCGTAGCGGAAGCAGACCTTCACAAGGGAATGTTTCAATAGGCCTAATCAGCAGCGAGAGTGTTCACTCAGACAACGACATCAGCATAAGGTCCGACGCAAGGAGCAGCATGCATTTAGATCATACGGGATCAGTGGGGGGAAGTGTTCATTCATGA 1629 0.4444 TLRRMNCFPCFSKSKKSNSKREQQVQTPQENVITTRTPPEVKKQKADDPNQVDTSNIQAQNFTFRELAIATKNFRQECLLGEGGFGRVYKGTIPATGQVVAVKQLDRNGVQGSKEFLAEVSMLSLLSHDNLIKLIGYCADGDQRLLVYEFMPAGSLESRLLERKPDEPPLDWYNRMKIASNAAKGLWYLHDKASPSVIYRDLKSANILLDNDFNAKLSDYGLAKLAGKDKMNIVPTRVMGTYGYSAPEYVRTGNLTLKSDVYSFGVILLELITGRRAIDTTKPHDEQNLVSWAQPIFRDPKRYPDMADPNLHKKFPEKDLNQVVAIAAMCLQEEAAARPLMSDVVTALSFLSTTPPKDDPEKSAATESEAGSGKDSDSSSDEESSCDEDNGTAQNESKELYSKSSHKSSGRSKNGTASSSHRSSSTLDSENESVSASNQSSRKSSKKSKKGSLGQKSSKSSKKSAAKVSNHKNGSRSSNSSGSSNNGDFFMRSGSRPSQGNVSIGLISSESVHSDNDISIRSDARSSMHLDHTGSVGGSVHS 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03388 542 Pfam Protein kinase domain 76 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03388 542 MobiDBLite consensus disorder prediction 13 53 - -
Pste5g03388 542 SUPERFAMILY Protein kinase-like (PK-like) 52 352 IPR011009 -
Pste5g03388 542 FunFam probable serine/threonine-protein kinase RLCKVII 46 150 - -
Pste5g03388 542 MobiDBLite consensus disorder prediction 454 515 - -
Pste5g03388 542 MobiDBLite consensus disorder prediction 407 442 - -
Pste5g03388 542 MobiDBLite consensus disorder prediction 21 38 - -
Pste5g03388 542 Gene3D Phosphorylase Kinase; domain 1 35 150 - -
Pste5g03388 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Pste5g03388 542 ProSitePatterns Protein kinases ATP-binding region signature. 80 103 IPR017441 GO:0005524
Pste5g03388 542 ProSiteProfiles Protein kinase domain profile. 74 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03388 542 SMART serkin_6 74 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03388 542 PANTHER OS07G0668900 PROTEIN 7 359 - -
Pste5g03388 542 CDD STKc_IRAK 80 348 - -
Pste5g03388 542 FunFam Serine/threonine-protein kinase PBS1 151 368 - -
Pste5g03388 542 Gene3D Transferase(Phosphotransferase) domain 1 151 370 - -
Pste5g03388 542 MobiDBLite consensus disorder prediction 352 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03388 Pste-Chr5 27278439 27281121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03388 5 399 Glycoside Hydrolase AT3G07070 60.644 1.15e-169 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pste5g03388 Pkinase 2.7e-47 CL0016